2022

Publications of the Department Members and Students in 2022

• Bates E.A., Davies J.A., Váňová J., Nestic D., Meniel V.S., Koushyar S., Cunliffe T.G., Mundy R.M., Moses E., Uusi-Kerttula H.K., Baker A.T., Cole D.K., Majhen D., Rizkallah P.J., Phesse T., Chester J.D., Parker A.L. (2022): Development of a low-seroprevalence, αvβ6 integrin-selective virotherapy based on human adenovirus type 10. Mol. Ther.-Oncolytics 25: 43-56. [PubMed]
• Beňová A., Ferenčáková M., Bardová K., Funda J., Procházka J., Spoutil F., Čajka T., Džubanová M, Balcaen T., Kerckhofs G., Willekens W., van Lenthe G.H., Alquicer G., Pecinová A., Mráček T., Horáková O., Rossmeisl M., Kopecký J., Tencerová M. (2022): Novel thiazolidinedione analog reduces a negative impact on bone and mesenchymal stem cell properties in obese mice compared to classical thiazolidinediones. Mol. Metab. 65: 101598. [PubMed]
• Blumenstein J., Rädisch R., Štěpánek V., Grulich M., Dostálová H., Pátek M. (2022): Identification of Rhodococcus erythropolis promoters controlled by alternative sigma factors using in vivo and in vitro systems and heterologous RNA polymerase. Curr. Microbiol. 79 (2): 55. [PubMed]
• Brajerová M., Ziková J., Krutová M. (2022): Clostridioides difficile epidemiology in the Middle and the Far East. Anaerobe 74: 102542. [PubMed]
• Brennerová M.V., Zavala-Meneses S.G., Josefiová J., Branny P., Buriánková K., Větrovský T., Junca H. (2022): A global survey reveals a divergent extradiol dioxygenase clade as a widespread complementary contributor to the biodegradation of mono- and polycyclic aromatic hydrocarbons. Environ. Res. 204 (Pt A): 111954. [PubMed]
• Budil J., Szabó O., Lišková P., Štenclová P., Izsák T., Potocký Š., Kromka A. (2022): Impact of electrolyte solution on electrochemical oxidation treatment of Escherichia coli K-12 by boron-doped diamond electrodes. Lett. Appl. Microbiol. 74 (6): 924-931. [PubMed]
• Cihlářová Z., Kubovčiak J., Sobol M., Krejčíková K., Sachová J., Kolář M., Staněk D., Bařinka C., Yoon G., Caldecott K.W., Hanzlíková H. (2022): BRAT1 links Integrator and defective RNA processing with neurodegeneration. Nat. Commun. 13 (1): 5026. [PubMed]
• Das S., Thakur S., Korenjak M., Sidorenko V.S., Chung F.F., Zavadil J. (2022): Aristolochic acid-associated cancers: a public health risk in need of global action. Nat. Rev. Cancer 22 (10): 576-591. [PubMed]
• Del Llano E., Iyyappan R., Aleshkina D., Mašek T., Dvořan M., Jiang Z., Pospíšek M., Kubelka M., Šušor A. (2022): SGK1 is essential for meiotic resumption in mammalian oocytes. Eur. J. Cell Biol. 101 (2): 151210. [PubMed]
• Do Pham D.D., Mojr V., Helusová M., Mikušová G., Pohl R., Dávidová E., Šanderová H., Vítovská D., Bogdanová K., Večeřová R., Sedláková M.H., Fišer R., Sudzinová P., Pospíšil J., Benada O., Křížek T., Galandáková A., Kolář M., Krásný L., Rejman D. (2022): LEGO-lipophosphonoxins: a novel approach in designing membrane targeting antimicrobials. J. Med. Chem. 65 (14): 10045-10078. [PubMed]
• Hadrava Váňová K., Uher O., Meuter L., Ghosal S., Talvacchio S., Patel M., Neužil J., Pacák K. (2022): PD-L1 expression and association with genetic background in pheochromocytoma and paraganglioma. Front. Oncol. 12: 1045517. [PubMed]
• Hardwick J.M., Knorre D., Palková Z., Winderickx J. (2022): Editorial: Yeast differentiation: From cell-to-cell heterogeneity to replicative aging and regulated cell death. Front. Cell Dev. Biol. 9: 823447. [PubMed]
• Holá D. (2022): Brassinosteroids and primary photosynthetic processes. In: Ahammed G.J., Sharma A., Yu J. (eds.): Brassinosteroids in Plant Developmental Biology and Stress Tolerance. Academic Press/Elsevier, London-Cambridge, MA-San Diego, CA-Oxford, pp. 59-104. [Elsevier]
• Horníková L., Bruštíková K., Huérfano S., Forstová J. (2022): Nuclear cytoskeleton in virus infection. Int. J. Mol. Sci. 23 (1): 578. [PubMed]
• Horvat M., Weilch V. Rädisch R., Hecko S., Schiefer A., Rudroff F., Wilding B., Klempier N., Pátek M., Martínková L., Winkler M. (2022): Chemoenzymatic one-pot reaction from carboxylic acid to nitrile via oxime. Catal. Sci. Technol. 12: 62-66. [PubMed]
• Huérfano Meneses S., Šroller V., Bruštíková K., Horníková L., Forstová J. (2022): The interplay between viruses and host DNA sensors. Viruses-Basel 14 (4): 666. [PubMed]
• Hyroššová P., Milošević M., Škoda J., Vachtenheim J. Jr., Rohlena J., Rohlenová K. (2022): Effects of metabolic cancer therapy on tumor microenvironment. Front. Oncol. 12: 1046630. [PubMed]
• Jakubec M., Pšenáková K., Švehlová K., Curtis E.A. (2022): Optimizing the chemiluminescence of a light-producing deoxyribozyme. ChemBioChem. 23 (10): e202200026. [PubMed]
• Kadlečková D., Tachezy R., Erban T., Deboutte W., Nunvář J., Saláková M., Matthijnssens J. (2022): The virome of healthy honey bee colonies: ubiquitous occurrence of known and new viruses in bee populations. mSystems 7 (3): e0007222. [PubMed]
• Kliegr T., Jarkovský J., Jiřincová H., Kuchař J., Karel T., Tachezy R. (2022): Role of population and test characteristics in antigen-based SARS-CoV-2 diagnosis, Czechia, August to November 2021. Eurosurveillance 27 (33): 2200070. [PubMed]
• Klímová N., Holubová J, Streparola G., Tomala J., Brázdilová L., Staněk O., Bumba L., Šebo P. (2022): Pertussis toxin suppresses dendritic cell-mediated delivery of B. pertussis into lung-draining lymph nodes. PLoS Pathog. 18 (6): e1010577. [PubMed]
• Král J., Ávilla Herrera I.M., Šťáhlavský F., Sadílek D.,  Pavelka J., Chatzaki M., Huber B.A. (2022): Karyotype differentiation and male meiosis in European clades of the spider genus Pholcus (Araneae, Pholcidae). Comp. Cytogenet. 16 (4): 185-209. [PubMed]
• Leischner Fialová J., Hönigová K., Raudenská M., Mikšátková L., Zobalová R., Navrátil J., Šmigová J., Moturu T.R., Vicar T., Balvan J., Veselá K., Abramenko N., Kejik Z., Kaplánek R., Gumulec J., Rösel D., Martásek P., Brábek J., Jakubek M., Neužil J., Masařík M. (2022): Pentamethinium salts suppress key metastatic processes by regulating mitochondrial function and inhibiting dihydroorotate dehydrogenase respiration. Biomed. Pharmacother. 154: 113582. [PubMed]
• Magalhaes-Novais S., Blecha J., Naraine R., Mikešová J., Abaffy P., Pecinová A., Miloševič M., Bohuslavová R, Procházka J., Khan S., Novotná E., Šindelka R., Macháň R., Dewerchin M., Vlčák E., Kalucká J., Štemberková Hubáčková S., Benda A., Goveia J., Mráček T., Bařinka C., Carmeliet P., Neužil J., Rohlenová K., Rohlena J. (2022): Mitochondrial respiration supports autophagy to provide stress resistance during quiescence. Autophagy 18 (10): 2409-2426. [PubMed]
• Martinović T., Kohout P., López-Mondéjar R., Algora Gallardo C., Starke R., Tomšovský M., Baldrian P. (2022): Bacterial community in soil and tree roots of Picea abies shows little response to clearcutting. FEMS Microbiol. Ecol. 98 (11): fiac118. [PubMed]
• Martinović T., Mašínová T., Lopez-Mondejar R., Jansa J., Štursová M., Starke R., Baldrian P. (2022): Microbial utilization of simple and complex carbon compounds in a temperate forest soil. Soil Biol. Biochem. 173: 108786. [Elsevier]
• Mukaj A., Petkov P.M., Resnick I., Tonchev A., Taniguchi H., Parvanov E.D. (2022): Emerging evidence for clinical significance of histone methyltransferase PRDM9 in reproductive system and cancer development. Anim. Sci. Pap. Rep. 40 (3): 239-252.
• Nahácka Z., Novák J., Zobalová R, Neužil J. (2022): Miro proteins and their role in mitochondrial transfer in cancer and beyond. Front. Cell Dev. Biol. 10: 937753. [PubMed]
• Nekvasilová P., Hovorková M., Mészáros Z., Petrásková L., Pelantová H., Křen V., Slámová K., Bojarová P. (2022): Engineered glycosidases for the synthesis of analogs of human milk oligosaccharides. Int. J. Mol. Sci. 23 (8): 4106. [PubMed]
• Nekvasilová P., Kulik N., Kotik,M., Petrásková L., Slámová K., Křen V., Bojarová P. (2022):  Mutation hotspot for changing the substrate specificity of β-N-acetylhexosaminidase: a library of GlcNAcases. Int. J. Mol. Sci. 23 (20): 12456. [PubMed]
• Němcová J., Riegert J., Černá K., Rob F., Šmahelová J., Hercogová J.T., Martínek P., Ondič O. (2022): Prevalence of oral and anal human papillomavirus infection in Czech predominantly Human immunodeficiency virus-positive men having sex with men - data from a previously unreported population. Int. J. STD AIDS 33 (12): 1054-1064. [PubMed]
• Nováková Z., Miloševič M., Kutil Z., Ondráková M., Havlínová B., Kašpárek P., Sandoval-Acuña C., Korandová Z., Truksa J., Vrbacký M., Rohlena J., Bařinka C. (2022): Generation and characterization of human U-2 OS cell lines with the CRISPR/Cas9-edited protoporphyrinogen oxidase IX gene. Sci. Rep. 12 (1): 17081. [PubMed]
• Obrová K., Vaňková E., Sláma M., Hodek J., Khun J., Ulrychová L., Nogueira F., Laos T., Sponseiler I., Kašparová P., Machková A., Weber J., Scholtz V., Lion T. (2022): Decontamination of high-efficiency mask filters from respiratory pathogens including SARS-CoV-2 by non-thermal plasma. Front. Bioeng. Biotechnol. 10: 815393. [PubMed]
• Patrmanová T., Křížková I., Rapoport D., Kopecký J., Hrychová Š., Sagová-Marečková M. (2022): Inoculations of soil by antagonistic strains modify tuberosphere bacterial communities and suppress common scab of potatoes. Appl. Soil Ecol. 176: 104491. [Elsevier]
• Petr M., Thiel D., Kvapilová K., Brož P., Malý T., Zahálka F., Vostatková P., Wilk M., Chycki J., Šťastný P. (2022): Speed and power-related gene polymorphisms associated with playing position in elite soccer players. Biol. Sport. 39 (2): 355–366. [PubMed]
• Pimková Polidarová M., Břehová P., Dejmek M., Birkuš G., Brázdová A. (2022): STING agonist-mediated cytokine secretion is accompanied by monocyte apoptosis. ACS Infect. Dis. 8 (3): 463-471. [PubMed]
• Pokrývková B., Grega M., Klozar J., Vencálek O., Nunvář J., Tachezy R. (2022): PD1⁺CD8⁺ cells are an independent prognostic marker in patients with head and neck cancer. Biomedicines 10 (11): 2794. [PubMed]
• Rädisch R., Pátek M., Křístková B., Winkler M., Křen V., Martínková L. (2022): Metabolism of aldoximes and nitriles in plant-associated bacteria and its potential in plant-bacteria interactions. Microorganisms 10 (3): 549. [PubMed]
• Riedlová K., Dolejšová T., Fišer R., Cwiklik L. (2022): H1 helix of colicin U causes phospholipid membrane permeation. Biochim. Biophys. Acta-Biomembr. 1864 (4): 183866. [PubMed]
• Rob F., Hugo J., Saláková M., Šmahelová J., Gkalpakiotis S., Boháč P., Tachezy R. (2022): Prevalence of genital and oral human papillomavirus infection among psoriasis patients on biologic therapy. Dermatol. Ther. 35 (10): e15735. [PubMed]
• Růžička J., Dalecká M., Šafránková K., Peretti D., Jendelová P., Kwok J.C.F., Fawcett J.W. (2022): Perineuronal nets affect memory and learning after synapse withdrawal. Transl. Psychiatry 12 (1): 480. [PubMed]
• Řezáč M., Tessler S., Heneberg P., Ávila Herrera I.M., Gloríková N., Forman M., Řezáčová V., Král J. (2022): Atypus karschi Dönitz, 1887 (Araneae: Atypidae): An Asian purse-web spider established in Pennsylvania, USA. PLoS One. 17 (7): e0261695. [PubMed]
• Saláková M., Ludvíková V., Hamšíková E., Kolářová M., Šroller V., Viklický O., Wohlfahrtová M. (2022): Pretransplantation seroreactivity in kidney donors and recipients as a predictive factor for posttransplant BKPyV-DNAemia. Front Immunol. 13: 929946. [PubMed]
• Šestáková Š., Cerovská E., Šálek C., Kundrát D., Ježíšková I., Folta A., Mayer J., Ráčil Z., Cetkovský P., Remešová H. (2022): A validation study of potential prognostic DNA methylation biomarkers in patients with acute myeloid leukemia using a custom DNA methylation sequencing panel. Clin. Epigenetics 14 (1): 22. [PubMed]
• Sheffer M.M., Cordellier M., Forman M., Grewoldt M., Hoffmann K., Jensen C., Kotz M., Král J., Kuss A.V., Líznarová E., Uhl G. (2022): Identification of sex chromosomes using genomic and cytogenetic methods in a range-expanding spider, Argiope bruennichi (Araneae: Araneidae). Biol. J. Linn. Soc. 136 (3): 405-416. [OUP]
• Šmahelová J., Hamšíková E., Ludvíková V., Vydrová J., Traboulsi J., Vencálek O., Lukeš P., Tachezy R. (2022): Outcomes after human papillomavirus vaccination in patients with recurrent respiratory papillomatosis: a nonrandomized clinical trial. JAMA Otolaryngol.-Head Neck Surg. 148 (7): 654-661. [PubMed]
• Soukup J., Kostelanská M., Kereïche S., Hujacová A., Pavelcová M., Petrák J., Kubala Havrdová E., Holada K. (2022): Flow cytometry analysis of blood large extracellular vesicles in patients with multiple sclerosis experiencing relapse of the disease. J. Clin. Med. 11 (10): 2832. [PubMed]
• Štemberková-Hubáčková S., Zobalová R., Dubišová M., Šmigová J., Dvořáková S., Kořínková K., Ezrová Z., Endaya B., Blažková K., Vlčák E., Brisudová P., Le D.T., Juhas S., Rösel D., Kelemen C.D., Sovilj D., Vacurová E., Čajka T., Filimonenko V., Dong L., Anděra L., Hozák P., Brábek J., Bielčiková Z., Štursa J., Werner L., Neužil J. (2022): Simultaneous targeting of mitochondrial metabolism and immune checkpoints as a new strategy for renal cancer therapy. Clin. Transl. Med. 12 (3): e645. [PubMed]
• Štěpánek V., Dostálová H., Busche T., Blumenstein J., Grulich M., Plašil L., Rucká L., Nešvera J., Pátek M. (2022): Sigma regulatory network in Rhodococcus erythropolis CCM2595. FEMS Microbiol. Lett. 369 (1): fnac014. [PubMed]
• Štundlová J., Hospodářská M., Lukšíková K., Voleníková A., Pavlica T., Altmanová M., Richter A., Reichard M., Dalíková M., Pelikánová Š., Marta A., Simanovsky S.A., Hiřman M., Jankásek M., Dvořák T., Bohlen J., Ráb P., Englert C., Nguyen P., Sember A. (2022): Sex chromosome differentiation via changes in the Y chromosome repeat landscape in African annual killifishes Nothobranchius furzeri and N. kadleci. Chromosome Res. 30 (4): 309-333 [PubMed]
• Švehlová K., Lukšan O., Jakubec M., Curtis E.A. (2022): Supernova: A deoxyribozyme that catalyzes a chemiluminescent reaction. Angew. Chem. Int. Ed. Engl. 61 (3): e202109347. [PubMed]
• Tate J.J., Maršíková J., Váchová L., Palková Z., Cooper T.G. (2022): Effects of abolishing Whi2 on the proteome and nitrogen catabolite repression-sensitive protein production. G3-Genes Genomes Genet. 12 (3): jkab432 [PubMed]
• Thakur S., Cahais V., Turková T., Zikmund T., Renard C., Stopka T., Korenjak M., Zavadil J. (2022): Chromatin remodeler Smarca5 is required for cancer-related processes of primary cell fitness and immortalization. Cells 11 (5): 808. [PubMed]
• Vacurová E., Trnovská J., Svoboda P., Škop V., Novosadová V., Reguera D.P., Petrezselyová S., Piavaux B., Endaya B., Spoutil F., Zudová D., Štursa J., Melcová M., Bielčiková Z., Werner L., Procházka J., Sedláček R., Huttl M., Štemberková Hubáčková S., Haluzík M., Neužil J. (2022): Mitochondrially targeted tamoxifen alleviates markers of obesity and type 2 diabetes mellitus in mice. Nat. Commun. 13 (1): 1866. [PubMed]
• Valihrach L., Matúšová Z., Zucha D., Klassen R., Benešová S., Abaffy P., Kubista M., Anděrová M. (2022): Recent advances in deciphering oligodendrocyte heterogeneity with single-cell transcriptomics. Front. Cell. Neurosci. 16: 1025012. [PubMed]
• Vaněková L, Pimková Polidarová M., Veverka V., Birkuš G., Brázdová A. (2022): Multiparametric flow cytometry-based immunophenotyping of mouse liver immune cells. Methods Protoc. 5 (5): 70. [PubMed]
• Váňová J., Číhařová B., Hejtmánková A., Epperla C.P., Škvára P., Forstová J., Hubálek Kalbáčová M., Španielová H. (2022): VirPorters: Insights into the action of cationic and histidine-rich cell-penetrating peptides. Int. J. Pharm. 611: 121308. [PubMed]
• Vráblíková A., Fojtíková M., Fraiberk M., Kotouček J., Kulich P., Brezani V., Gebauer J., Novobilský A., Mašková E., Zechmeisterová K., Straková N., Mašek J., Pšíkal I., Hezová R. (2022): Development of modern immunizing agent against porcine circovirus type 2 infection based on chimeric VP1-PCV2bCap recombinant protein. doi: 10.21203/rs.3.rs-2263216/v1  [ResearchSquare]
• Zahradník J., Nunvář J., Schreiber G. (2022): Perspectives: SARS-CoV-2 spike convergent evolution as a guide to explore adaptive advantage. Front. Cell. Infect. Microbiol. 12: 748948. [PubMed]

Publications only in Czech language are excluded from this list.