Publications of the Department Members and Students in 2019
Bajzíková M., Kovářová J., Coelho A.R., Boukalová Š., Oh S., Rohlenová K., Švec D., Hubáčková S., Endaya B., Judasová K., Bezawork-Geleta A., Klučková K., Chatre L., Zobalová R., Nováková A., Váňová K., Ezrová Z., Maghzal G.J., Magalhaes Novais S., Olšinová M., Krobová L., An Y.J., Davidová E., Nahácka Z., Sobol M., Cunha-Oliveira T., Sandoval-Acuña C., Strnad H., Zhang T., Huynh T., Serafim T.L., Hozák P., Sardao V.A., Koopman W.J.H., Ricchetti M., Oliveira P.J., Kolář F., Kubista M., Truksa J., Dvořáková-Hortová K., Pacák K., Gurlich R., Stocker R., Zhou Y., Berridge M.V., Park S., Dong L., Rohlena J., Neužil J. (2019): Reactivation of dihydroorotate dehydrogenase-driven pyrimidine biosynthesis restores tumor growth of respiration-deficient cancer cells. Cell Metab. 29 (2): 399-416. [PubMed]
Biedermann P.H.W., Grégoire J., Gruppe A., Hagge J., Hammerbacher A., Hofstetter R., Kandasamy D., Kolařík M., Kostovčík M., Krokene P., Mülle, J., Sallé A., Six D.L., Turrini T., Vanderpool D., Wingfield M., Bässler C. (2019): Bark beetle population dynamics in the Anthropocene: challenges and solutions. Trends Ecol. Evol. 10: 914-924. [PubMed]
Božinović K., Sabol I., Dediol E., Milutin Gašperov N., Manojlović S., Vojtěchová Z., Tachezy R., Grce M. (2019): Genome-wide miRNA profiling reinforces the importance of miR-9 in human papillomavirus associated oral and oropharyngeal head and neck cancer. Sci. Rep. 9 (1): 2306. [PubMed]
Dolejšová T., Sokol A., Bosák J., Šmajs D., Konopásek I., Mikušová G., Fišer R. (2019): Colicin U from Shigella boydii forms voltage-dependent pores. J. Bacteriol. 201 (24): pii: e00493-19. [PubMed]
Hejtmánková A., Roubalová K., Forejtová A., Žáčková Suchanová J., Forstová J., Viklický O., Španielová H. (2019): Prevalence of antibodies against BKPyV subtype I and IV in kidney transplant recipients and in the general Czech population. J. Med. Virol. 91 (5): 856-864. [PubMed]
Holá D. (2019): Role of brassinosteroids in the plant response to drought: Do we know anything for certain? In: Hayat S., Yusuf M., Bhardwaj R., Bajguz A. (eds) Brassinosteroids: Plant Growth and Development. Springer, Singapore, pp. 101-168. [SpringerLink]
Hubáčková S., Davidová E., Rohlenová K., Štursa J., Werner L., Anděra L., Dong L.F., Terp M., Hodný Z., Ditzel H.J., Rohlena J., Neužil J. (2019): Selective elimination of senescent cells by mitochondrial targeting is regulated by ANT2. Cell Death Differ. 26 (2): 276-290. [PubMed]
Kotková H., Cabrnochová M., Lichá I., Tkadlec J., Fila L., Bartošová J., Melter O. (2019): Evaluation of TD test for analysis of persistence or tolerance in clinical isolates of Staphylococcus aureus. J. Microbiol. Methods. 167: 105705. [PubMed]
Král J., Forman M., Kořínková T., Lerma A.C.R., Haddad C.R., Musilová J., Řezáč M., Ávila Herrera I.M., Thakur S., Dippenaar-Schoeman A.S., Marec F., Horová L., Bureš P. (2019): Insights into the karyotype and genome evolution of haplogyne spiders indicate a polyploid origin of lineage with holokinetic chromosomes. Sci. Rep. 9 (1): 3001. [PubMed]
Kouba T., Pospíšil J., Hnilicová J., Šanderová H., Barvík I., Krásný L. (2019): The core and holoenzyme forms of RNA polymerase from Mycobacterium smegmatis. J. Bacteriol. 201 (4): e00583-18. [PubMed]
Lhotáková K., Grzelak A., Poláková I., Vacková J., Šmahel M. (2019): Establishment and characterization of a mouse tumor cell line with irreversible downregulation of MHC class I molecules. Oncol. Rep. 42 (6): 2826-2835. [PubMed]
Lišková P., Konopásek I., Fišer R. (2019): Simple way to detect Trp to Tb3+ resonance energy transfer in calcium-binding peptides using excitation spectrum. J. Fluoresc. 29 (1): 9-14. [PubMed]
Lustyk D., Kinský S., Ullrich K.K., Yancoskie M., Kašíková L., Gergelits V., Sedláček R., Chan Y.F., Odenthal-Hesse L., Forejt J., Jansa P. (2019): Genomic structure of Hstx2 modifier of Prdm9-dependent hybrid male sterility in mice. Genetics 213 (3): 1047-1063. [PubMed]
Mácová I., Pysanenko K., Chumak T., Dvořáková M., Bohuslavová R., Syka J., Fritzsch B., Pavlínková G. (2019): Neurod1 is essential for the primary tonotopic organization and related auditory information processing in the midbrain. J. Neurosci. 39 (6): 984-1004. [PubMed]
Mahjoub A., Cihlářová Z., Tétreault M., MacNeil L., Sondheimer N., Caldecott K.W., Hanzlíková H., Yoon G., Care4Rare Canada Consortium (2019): Homozygous pathogenic variant in BRAT1 associated with nonprogressive cerebellar ataxia. Neurol. - Genet. 5 (5): e359. [PubMed]
Majerová T., Novotný P., Krýsová E., Konvalinka J. (2019): Exploiting the unique features of Zika and Dengue proteases for inhibitor design. Biochimie 166: 132-141. [PubMed]
Malíček J., Palice Z., Vondrák J., Kostovčík M., Lenzová V., Hofmeister J. (2019): Lichens in old-growth and managed mountain spruce forests in the Czech Republic: assessment of biodiversity, functional traits and bioindicators. Biodivers. Conserv. 28 (13): 3497-3528. [SpringerLink]
Micenková L., Bosák J., Kučera J., Hrala M., Dolejšová T., Šedo O., Linke D., Fišer R., Šmajs D. (2019): Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains. Sci. Rep. 9: 11127. [PubMed]
Novák K., Bjelka M., Samake K., Valčíková T. (2019): Potential of TLR-gene diversity in Czech indigenous cattle for resistance breeding as revealed by hybrid sequencing. Arch. Anim. Breed. 62: 477-490. [PubMed]
Novotná B., Vaneková L,, Zavřel M., Buděšínský M., Dejmek M., Smola M., Gutten O., Tehrani Z.A., Pimková Polidarová M., Brázdová A., Liboska R., Štěpánek I., Vavřina Z., Jandušík T., Nencka R., Rulíšek L., Bouřa E., Brynda J., Páv O., Birkuš G. (2019): Enzymatic preparation of 2'-5',3'-5'-cyclic dinucleotides, their binding properties to stimulator of interferon genes adaptor protein, and structure/activity correlations. J. Med. Chem. 62 (23): 10676-10690. [PubMed]
Pelclová D., Navrátil T., Kačerová T., Zámostná B., Fenclová Z., Vlčková Š., Kačer P. (2019): NanoTiO 2 Sunscreen does not prevent systemic oxidative stress caused by UV radiation and a minor amount of NanoTiO 2 is absorbed in humans. Nanomaterials 9 (6): 888. [PubMed]
Pelclová D., Talacko P., Navrátil T., Zámostná B., Fenclová Z., Vlčková Š., Zakharov S. (2019): Can proteomics predict the prognosis in chronic dioxin intoxication? Mon. Chem. 150: 1715-1722. [SpringerLink]
Poláková I., Pelák O., Thürner D., Pokrývková B., Tachezy R., Kalina T., Šmahel M. (2019): Implementation of mass cytometry for immunoprofiling of patients with solid tumors. J. Immunol. Res. 2019: 6705949. [PubMed]
Poncová K., Wagner S., Jansen M.E., Beznosková P., Gunišová S., Herrmannová A., Zeman J., Dong J., Valášek L.S. (2019): uS3/Rps3 controls fidelity of translation termination and programmed stop codon readthrough in co-operation with eIF3. Nucleic Acids Res. 47 (21): 11326-11343. [PubMed]
Pyszko P., Šigut M., Kostovčík M., Drozd P., Hulcr J. (2019): High-diversity microbiomes in the guts of bryophagous beetles (Coleoptera: Byrrhidae). Eur. J. Entomol. 16: 432–441 [biotaxa.org]
Raschmanová H., Zamora I., Borčinová M., Meier P., Weninger A., Mächler D., Glieder A., Melzoch K., Knejzlík Z., Kovář K. (2019): Single-cell approach to monitor the unfolded protein response during biotechnological processes with Pichia pastoris. Front. Microbiol. 10: 335. [PubMed]
Roderová J., Osičková A., Suková A., Mikušová G., Fišer R., Šebo P., Osička R, Mašín J. (2019): Residues 529 to 549 participate in membrane penetration and pore-forming activity of the Bordetella adenylate cyclase toxin. Sci. Rep. 9 (1): 5758. [PubMed]
Roithová A., Staněk D. (2019): Analysis of spliceosomal snRNA localization in human Hela cells using microinjection. J. Vis. Exp. 150: e59797. [PubMed]
Seydlová G., Sokol A., Lišková P., Konopásek I., Fišer R. (2019): Daptomycin pore formation and stoichiometry depend on membrane potential of target membrane. Antimicrob. Agents Chemother. 63 (1): e01589-18. [PubMed]
Šiková M., Janoušková M., Ramaniuk O., Páleníková P., Pospíšil J., Bartl P., Suder A., Pajer P., Kubičková P., Pavliš O., Hradilová M., Vítovská D., Šanderová H., Převorovský M., Hnilicová J., Krásný L. (2019): Ms1 RNA increases the amount of RNA polymerase in Mycobacterium smegmatis. Mol. Microbiol. 111 (2): 354-372. [PubMed]
Simonidesová S., Hamšíková E., Ludvíková V., Klozar J., Vencálek O., Tachezy R. (2019): Prognostic value of posttreatment HPV-specific antibodies in patients with oropharyngeal tumors. J. Surg. Oncol. 120 (2): 117-124. [PubMed]
Srb P., Svoboda M., Benda L., Lepšík M., Tarábek J., Šícha V., Grüner B., Grantz-Šašková K., Brynda J., Řezáčová P., Konvalinka J., Veverka V. (2019): Capturing a dynamically interacting inhibitor by paramagnetic NMR spectroscopy. Phys. Chem. Chem. Phys. 21 (10): 5661-5673. [PubMed]
Stehlíková Z., Tláskal V., Galánová N., Roubalová R., Kreisinger J., Dvořák J., Procházková P., Kostovčíková K., Bártová J., Libáňská M., Čermáková R., Schierová D., Fassman A., Bořilová Linhartová P., Coufal Š., Kverka M., Izakovicova-Holla L., Petánová J., Tláskalová-Hogenová H., Jirásková Zákostelská Z. (2019): Oral microbiota composition and antimicrobial antibody response in patients with recurrent aphthous stomatitis. Microorganisms 7 (12): 636. [PubMed]
Svoboda M., Konvalinka J., Trempe J.F., Grantz-Šašková K. (2019): The yeast proteases Ddi1 and Wss1 are both involved in the DNA replication stress response. DNA Repair 80: 45-51. [PubMed]
Tetková A., Susor A., Kubelka M., Němcová L., Jansová L., Dvořan M., Del Llano E., Holubcová Z., Kalous J. (2019): Follicle-stimulating hormone administration affects amino acid metabolism in mammalian oocytes. Biol. Reprod. 101 (4): 719-732. [PubMed]
Váchová L., Palková Z. (2019): Diverse roles of Tup1p and Cyc8p transcription regulators in the development of distinct types of yeast populations. Curr. Genet. 65 (1): 147-151. [PubMed]
Váňová J., Hejtmánková A., Kalbáčová M.H., Španielová H. (2019): The utilization of cell-penetrating peptides in the intracellular delivery of viral nanoparticles. Materials 12 (17): E2671. [PubMed]
Vopálenský V., Sýkora M., Mašek T., Pospíšek M. (2019): Messenger RNAs of yeast virus-like elements contain non-templated 5′ poly(A) leaders, and their expression is independent of eIF4E and Pab1. Front. Microbiol. 10: 2366. [PubMed]
Vorlová B., Sedlák F., Kašpárek P., Šrámková K., Malý M., Zámečník J., Šácha P., Konvalinka J. (2019): A novel PSMA/GCPII‐deficient mouse model shows enlarged seminal vesicles upon aging. Prostate 79 (2): 126-139. [PubMed]
Publications only in Czech language are excluded from this list.