Seznam publikací katedry

Výběr nejvýznamnějších publikací katedry je k dispozici zde.

2023

Shukla, S.; Komárek, J.; Nováková, Z.; Nedvědová, J.; Ustinova, K.; Vaňková, P.; Kádek, A.; Uetrecht, Ch.; Mertens, H.; Bařinka, C.; In-solution structure and oligomerization of human histone deacetylase 6 – an integrative approach. FEBS Journal, 2023, Roč. 290, č. 3, s.821-836. DOI: 10.1111/febs.16616

Alquezar Artieda, N.; Kužílková, D.; Roberts, J.; Hložková, K.; Pecinova, A.; Pecina, P.; Zwyrtková, M.; Potůčková, E.; Kavan, D.; Heřmanová, I.; Žaliová, M.; Novák, P.; Mracek, T.; Šrámková, L.; Tennant, DA.; Trka, J.; Starková, J.; Restored biosynthetic pathways induced by MSCs serve as rescue mechanism in leukemia cells after L-asparaginase therapy. Blood Advances, 2023, Roč. 7, č. 10, s.2228-2236. DOI: 10.1182/bloodadvances.2021006431

Burešová, M.; Benešová, L.; Minárik, M.; Ptáčková, R.; Hálková, T.; Hošek, P.; Baxa, J.; Pešek, M.; Svatoň, M.; Fiala, O.; Circulating Tumor DNA correlates with Lactate Dehydrogenase, CYFRA 21-1, and CRP levels in patients with advanced NSCLC. Journal of Cancer, 2023, Roč. 14, č. 1, s.1-8. DOI: 10.7150/jca.78574

Pimková Polidarová, M.; Vaneková, L.; Břehová, P.; Dejmek, M.; Vavřina, Z.; Birkuš, G.; Brázdová, A.; Synthetic Stimulator of Interferon Genes (STING) Agonists Induce a Cytokine-Mediated Anti-Hepatitis B Virus Response in Nonparenchymal Liver Cells. ACS Infectious Diseases, 2023, Roč. 9, č. 1, s.23-32. DOI: 10.1021/acsinfecdis.2c00424

Horáčková, K.; Fraňková, S.; Zemánková, P.; Nehasil, P.; Černá, M.; Neroldova, M.; Otáhalová, B.; Král, J.; Hovhannisyan, M.; Stránecký, V.; Zima, T.; Šafaříková, M.; Kalousová, M.; CZECANCA, C.; Novotný, J.; Šperl, J.; Borecká, M.; Jelínková, S.; Vočka, M.; Janatová, M.; Kleiblová, P.; Kleibl, Z.; Jirsa, M.; Soukupová, J.; Low Frequency of Cancer-Predisposition Gene Mutations in Liver Transplant Candidates with Hepatocellular Carcinoma. Cancers, 2023, Roč. 15, č. 1, DOI: 10.3390/cancers15010201

Otáhalová, B.; Volková, Z.; Soukupová, J.; Kleiblová, P.; Janatová, M.; Vočka, M.; Macurek, L.; Kleibl, Z.; Importance of Germline and Somatic Alterations in Human MRE11, RAD50, and NBN Genes Coding for MRN Complex. International Journal of Molecular Sciences, 2023, Roč. 24, č. 6, DOI: 10.3390/ijms24065612

Mitrovský, O.; Myslivcová, D.; Macháčková Lopotová, T.; Obr, A.; Čermáková, K.; Ransdorfová, Š.; Březinová, J.; Klamová, H.; Žáčková, M.; Inhibition of casein kinase 2 induces cell death in tyrosine kinase inhibitor resistant chronic myelogenous leukemia cells. PLoS One, 2023, Roč. 18, č. 5, DOI: 10.1371/journal.pone.0284876

Dvořák, J.; Nováková, J.; Kraftová, L.; Heringová, V.; Matějovič, M.; Raděj, J.; Karvunidis, T.; Horák, J.; Královcová, M.; Hrabák, J.; Kalaninová, Z.; Volný, M.; Novák, P.; Pompach, P.; The rapid detection of procalcitonin in septic serum using immunoaffinity MALDI chips. Clinical Proteomics, 2023, Roč. 20, č. 1, DOI: 10.1186/s12014-023-09410-3

Lin, J.; Selicharová, I.; Mitrová, K.; Fabre, B.; Miriyala, VM.; Lepšík, M.; Jiráček, J.; Hernández, MSG.; Targeting the insulin receptor with hormone and peptide dimers. Journal of Peptide Science, 2023, Roč. 29, č. 4, DOI: 10.1002/psc.3461

Vávra, J.; Sergunin, A.; Farná, A.; Ovad, T.; Shimizu, T.; Martínková, M.; Is ATP the Only Nucleoside Triphosphate among ATP, CTP, GTP, and UTP to Have a Role in Kinase Catalysis of Heme-Regulated Inhibitor toward eIF2α during Lung Cancer Development?. Catalysts, 2023, Roč. 13, č. 2, DOI: 10.3390/catal13020281

Král, J.; Jelínková, S.; Zemánková, P.; Vočka, M.; Borecká, M.; Černá, L.; Černá, M.; Dostálek, L.; Dušková, P.; Foretová, L.; Havránek, O.; Horáčková, K.; Hovhannisyan, M.; Chvojka, Š.; Kalousová, M.; Kosařová, M.; Koudová, M.; Krutílková, V.; Macháčková, E.; Nehasil, P.; Novotný, J.; Otáhalová, B.; Puchmajerová, A.; Šafaříková, M.; Sláma, J.; Stránecký, V.; Šubrt, I.; Tavandzis, S.; Zikán, M.; Zima, T.; Soukupová, J.; Kleiblová, P.; Kleibl, Z.; Janatová, M.; Germline multigene panel testing of patients with endometrial cancer. Oncology Letters, 2023, Roč. 25, č. 6, DOI: 10.3892/ol.2023.13802

Vávra, J.; Sergunin, A.; Pompach, P.; Savchenko, D.; Hraníček, J.; Šloufová, I.; Shimizu, T.; Martínková, M.; Characterization of the interaction between the tumour suppressor p53 and heme and its role in the protein conformational dynamics studied by various spectroscopic techniques and hydrogen/deuterium exchange coupled with mass spectrometry. Journal of Inorganic Biochemistry, 2023, Roč. 243, č. June, DOI: 10.1016/j.jinorgbio.2023.112180

Lin, J.; Asai, S.; Selicharová, I.; Mitrová, K.; Kaminský, J.; Young, E.; Jiráček, J.; Recombinant Insulin-Like Growth Factor 1 Dimers: Receptor Binding Affinities and Activation Abilities. International Journal of Peptide Research and Therapeutics, 2023, Roč. 29, č. 2, DOI: 10.1007/s10989-023-10499-1

Heames, B.; Buchel, F.; Aubel, M.; Treťjačenko, V.; Loginov, D.; Novák, P.; Lange, A.; Bornberg-Bauer, E.; Hlouchová, K.; Experimental characterization of de novo proteins and their unevolved random-sequence counterparts. NATURE ECOLOGY & EVOLUTION, 2023, Roč. 7, č. 4, s.570-580. DOI: 10.1038/s41559-023-02010-2

Vaneková, L.; Pimková Polidarová, M.; Charvát, V.; Vavřina, Z.; Veverka, V.; Birkuš, G.; Brázdová, A.; Development and Characterization of a Chronic Hepatitis B Murine Model With a Mutation in the START Codon of an HBV Polymerase. Physiological Research, 2023, Roč. 72, č. 1, s.37-47. DOI: 10.33549/physiolres.934979

Osičková, A.; Knoblochová, Š.; Bumba, L.; Man, P.; Kalaninová, Z.; Lepesheva, A.; Jurnečka, D.; Čížková, M.; Biedermannová, L.; Goldsmith, JA.; Maynard, JA.; McLellan, JS.; Osička, R.; Šebo, P.; Mašín, J.; A conserved tryptophan in the acylated segment of RTX toxins controls their β₂ integrin–independent cell penetration. Journal of Biological Chemistry, 2023, Roč. 299, č. 8, DOI: 10.1016/j.jbc.2023.104978

Jaklová Dytrtová, J.; Bělonožníková, K.; Jakl, M.; Chmelík, J.; Kovač, I.; Ryšlavá, H.; Non-target biotransformation enzymes as a target for triazole-zinc mixtures. Chemico-Biological Interactions, 2023, Roč. 382, č. September, DOI: 10.1016/j.cbi.2023.110625

Rákosníková, T.; Kelifová, S.; Štufková, H.; Lokvencová, K.; Lišková, P.; Kousal, B.; Honzík, T.; Hansíková, H.; Martínek, V.; Tesařová, M.; Case report: A rare variant m.4135T>C in the MT-ND1 gene leads to Leber hereditary optic neuropathy and altered respiratory chain supercomplexes. Frontiers in Genetics, 2023, Roč. 14, č. May, DOI: 10.3389/fgene.2023.1182288

Kutálková, E.; Ingr, M.; Kolaříková, A.; Hrnčiřík, J.; Witasek, R.; Hermannová, M.; Štrympl, O.; Huerta-Ángeles, G.; Structure and dynamics of the hyaluronan oligosaccharides and their solvation shell in water: Organic mixed solvents. Carbohydrate Polymers, 2023, Roč. 304, č. March, DOI: 10.1016/j.carbpol.2022.120506

Ječmen, T.; Tuzhilkin, R.; Šulc, M.; Photo-Methionine, Azidohomoalanine and Homopropargylglycine Are Incorporated into Newly Synthesized Proteins at Different Rates and Differentially Affect the Growth and Protein Expression Levels of Auxotrophic and Prototrophic E. coli in Minimal Medium. International Journal of Molecular Sciences, 2023, Roč. 24, č. 14, DOI: 10.3390/ijms241411779

Pham, PN.; Zahradník, J.; Kolářová, L.; Schneider, B.; Fuertes Vives, G.; Regulation of IL-24/IL-20R2 complex formation using photocaged tyrosines and UV light. Frontiers in Molecular Biosciences, 2023, Roč. 10, č. July, DOI: 10.3389/fmolb.2023.1214235

Stolařová, L.; Kleiblová, P.; Zemánková, P.; Šťastná, B.; Janatová, M.; Soukupová, J.; Achatz, MI.; Ambrosone, Ch.; Apostolou, P.; Arun, BK.; Auer, P.; Barnard, M.; Bertelsen, B.; Japan, B.; Blok, MJ.; Boddicker, N.; Brunet, J.; Burnside, ES.; Calvello, M.; Campbell, I.; Chan, SH.; Chen, F.; Chiang, JB.; Coppa, A.; Cortesi, L.; Crujeiras-González, A.; Czecanca, C.; De Leeneer, K.; De Putter, R.; DePersia, A.; Devereux, L.; Domchek, S.; Efremidis, A.; Engel, Ch.; Ernst, C.; Evans, GD.; Feliubadaló, L.; Fostira, F.; Fuentes-Ríos, O.; Gómez-García, EB.; González, S.; Haiman, Ch.; van Overeem Hansen, T.; Hauke, J.; Hodge, J.; Hu, Ch.; Huang, H.; Binte Ishak, ND.; Iwasaki, Y.; Konstantopoulou, I.; Kraft, P.; Lacey, J.; Lázaro, C.; Li, N.; Lim, WK.; Lindstrom, S.; Lori, A.; Martinez, E.; Martins, A.; Matsuda, K.; Matullo, G.; McInerny, S.; Michailidou, K.; Montagna, M.; Monteiro, AN.; Mori, L.; Nathanson, K.; Neuhausen, SL.; Nevanlinna, H.; Olson, JE.; Palmer, J.; Pasini, B.; Patel, A.; Piane, M.; Poppe, B.; Radice, P.; Renieri, A.; Resta, N.; Richardson, ME.; Rosseel, T.; Ruddy, KJ.; Santamariña, M.; Dos Santos, ES.; Teras, L.; Toland, AE.; Trentham-Dietz, A.; Vachon, CM.; Volk, AE.; Weber-Lassalle, N.; Weitzel, JN.; Wiesmuller, L.; Winham, S.; Yadav, S.; Yannoukakos, D.; Yao, S.; Zampiga, V.; Zethoven, M.; Zhang, ZW.; Zima, T.; Spurdle, AB.; Vega, A.; Rossing, M.; Del Valle, J.; De Nicolo, A.; Hahnen, E.; Claes, KB.; Ngeow, J.; Momozawa, Y.; James, PA.; Couch, FJ.; Macůrek, L.; Kleibl, Z.; ENIGMA CHEK2gether Project: A Comprehensive Study Identifies Functionally Impaired CHEK2 Germline Missense Variants Associated with Increased Breast Cancer Risk. Clinical Cancer Research, 2023, Roč. 29, č. 16, s.3037-3050. DOI: 10.1158/1078-0432.CCR-23-0212

Dejmek, M.; Brázdová, A.; Otava, T.; Pimková Polidarová, M.; Klima, M.; Smola, M.; Vavřina, Z.; Buděšínský, M.; Dračínský, M.; Liboska, R.; Bouřa, E.; Birkuš, G.; Nencka, R.; Vinylphosphonate-based cyclic dinucleotides enhance STING-mediated cancer immunotherapy. European Journal of Medicinal Chemistry, 2023, Roč. 259, č. November, DOI: 10.1016/j.ejmech.2023.115685

Hýsková, V.; Jakl, M.; Jaklová Dytrtová, J.; Cavar Zeljkovic, S.; Vrobel, O.; Bělonožníková, K.; Kavan, D.; Křížek, T.; Šimonová, A.; Vašková, M.; Kovač, I.; Račko Žufić, A.; Ryšlavá, H.; Triazoles as a Potential Threat to the Nutritional Quality of Tomato Fruits. Metabolites, 2023, Roč. 13, č. 9, DOI: 10.3390/metabo13090988

Polák, M.; Palasser, M.; Kádek, A.; Kavan, D.; Wootton, ChA.; Delsuc, M.; Breuker, K.; Novák, P.; van Agthoven, MA.; Top-Down Proteoform Analysis by 2D MS with Quadrupolar Detection. Analytical Chemistry, 2023, Roč. 95, č. 44, s.16123-16130. DOI: 10.1021/acs.analchem.3c02225

Potalitsyn, P.; Mrázková, L.; Selicharová, I.; Tencerová, M.; Ferenčáková, M.; Chrudinová, M.; Turnovská, T.; Brzozowski, AM.; Marek, A.; Kaminský, J.; Jiráček, J.; Žáková, L.; Non-glycosylated IGF2 prohormones are more mitogenic than native IGF2. Communications Biology, 2023, Roč. 6, č. 1, DOI: 10.1038/s42003-023-05239-6

Hýsková, V.; Jakl, M.; Jaklová Dytrtová, J.; Zeljković, SĆ.; Vrobel, O.; Bělonožníková, K.; Kavan, D.; Křížek, T.; Šimonová, A.; Vašková, M.; Kovač, I.; Račko Žufić, A.; Ryšlavá, H.; Antifungal triazoles affect key non-target metabolic pathways in Solanum lycopersicum L. plants. Ecotoxicology and Environmental Safety, 2023, Roč. 268, č. neuvedeno, s.1-12. DOI: 10.1016/j.ecoenv.2023.115729

Di Carluccio, C.; Milanesi, F.; Civera, M.; de Sousa Santos Abreu, C.; Sattin, S.; Francesconi, O.; Molinaro, A.; Vaněk, O.; Marchetti, R.; Silipo, A.; Tumor Carbohydrate Associated Antigen Analogs as Potential Binders for Siglec-7. European Journal of Organic Chemistry, 2023, Roč. 26, č. 40, DOI: 10.1002/ejoc.202300644

Bělonožníková, K.; Černý, M.; Hýsková, V.; Synková, H.; Valcke, R.; Hodek, O.; Křížek, T.; Kavan, D.; Vaňková, R.; Dobrev, PI.; Haisel, D.; Ryšlavá, H.; Casein as protein and hydrolysate: Biostimulant or nitrogen source for Nicotiana tabacum plants grown in vitro?. Physiologia Plantarum, 2023, Roč. 175, č. 4, DOI: 10.1111/ppl.13973

Ondráčková, A.; Stiborová, M.; Dračínská, H.; Havran, L.; Schwarzová-Pecková, K.; Fojta, M.; A study on redox reactions of the azo dye Sudan I and its hydroxylated metabolites on pyrolytic graphite and boron doped diamond electrodes to support electrochemical studies of metabolic transformations. Electrochimica Acta, 2023, Roč. 468, č. November, DOI: 10.1016/j.electacta.2023.143162

Zákopčaník, M.; Kavan, D.; Novák, P.; Loginov, DS.; Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis. Journal of Proteome Research, 2023, Roč. 23, č. 2, s.609-617. DOI: 10.1021/acs.jproteome.3c00390

Das, G.; Ptáček, J.; Havlínová, B.; Nedvědová, J.; Bařinka, C.; Nováková, Z.; Targeting Prostate Cancer Using Bispecific T-Cell Engagers against Prostate-Specific Membrane Antigen. ACS Pharmacology & Translational Science, 2023, Roč. 6, č. 11, s.1703-1714. DOI: 10.1021/acsptsci.3c00159

Vermeire, P.; Lilina, AV.; Hashim, HM.; Dlabolová, L.; Fiala, J.; Beelen, S.; Kukačka, Z.; Harvey, JN.; Novák, P.; Strelkov, SV.; Molecular structure of soluble vimentin tetramers. Scientific Reports, 2023, Roč. 13, č. 1, DOI: 10.1038/s41598-023-34814-4

Bělonožníková, K.; Stefani Sladkovská, E.; Kavan, D.; Hýsková, V.; Hodek, P.; Šmíd, D.; Ryšlavá, H.; Effect of Agrimonia eupatoria L. and Origanum vulgare L. Leaf, Flower, Stem, and Root Extracts on the Survival of Pseudomonas aeruginosa. Molecules, 2023, Roč. 28, č. 3, DOI: 10.3390/molecules28031019

Buša, M.; Matoušková, Z.; Bartošová-Sojková, P.; Pachl, P.; Řezáčová, P.; Eichenberger, RM.; Deplazes, P.; Horn, M.; Štefanić, S.; Mareš, M.; An evolutionary molecular adaptation of an unusual stefin from the liver fluke Fasciola hepatica redefines the cystatin superfamily. Journal of Biological Chemistry, 2023, Roč. 299, č. 3, DOI: 10.1016/j.jbc.2023.102970

Kolenko, P.; Mikulecký, P.; Pham, PN.; Malý, M.; Schneider, B.; Diffraction anisotropy and paired refinement: crystal structure of H33, a protein binder to interleukin 10. Journal of Applied Crystallography, 2023, Roč. 56, č. June, s.1261-1266. DOI: 10.1107/S160057672300479X

KAPITOLA V KNIZE (3)

Vávra, J.; Sergunin, A.; Stráňava, M.; Kádek, A.; Shimizu, T.; Man, P.; Martínková, M.; Weinert, EE.; Hydrogen/deuterium exchange mass spectrometry of heme-based oxygen sensor proteins. Oxygen sensing: Methods and Protocols, 2023, s.99-122. DOI: 10.1007/978-1-0716-3080-8_8

Vávra, J.; Sergunin, A.; Shimizu, T.; Martínková, M.; Weinert, EE.; Monitoring the Kinase Activity of Heme-Based Oxygen Sensors and Its Dependence on O₂ and Other Ligands Using Phos-Tag Electrophoresis. Oxygen sensing: Methods and Protocols, 2023, s.63-73. DOI: 10.1007/978-1-0716-3080-8_5

Kalaninová, Z.; Fojtík, L.; Chmelík, J.; Novák, P.; Volný, M.; Man, P.; Gevaert, K.; Probing antibody structures by hydrogen/deuterium exchange mass spectrometry. Mass Spectrometry-Based Proteomics, 2023, s.303-334. DOI: 10.1007/978-1-0716-3457-8_17

SOUHRNNÁ VÝZKUMNÁ ZPRÁVA (1)

Skořepa, O.; Vaněk, O.; Plasmid preparation: Optimization of 17-β-hydroxysteroid dehydrogenase 1 (HSD17B1) recombinant expression. 2023

2022

Benýšek, J.; Buša, M.; Rubešová, P.; Fanfrlík, J.; Lepšík, M.; Brynda, J.; Matoušková, Z.; Bartz, U.; Horn, M.; Gütschow, M.; Mareš, M.; Highly potent inhibitors of cathepsin K with a differently positioned cyanohydrazide warhead: structural analysis of binding mode to mature and zymogen-like enzymes. Journal of Enzyme Inhibition and Medicinal Chemistry, 2022, Roč. 37, č. 1, s.515-526. DOI: 10.1080/14756366.2021.2024527
Lášek, T.; Petrová, M.; Košiová, I.; Šimák, O.; Buděšínský, M.; Kozák, J.; Snášel, J.; Vavřina, Z.; Birkuš, G.; Rosenberg, I.; Páv, O.; 5'-Phosphonate modified oligoadenylates as potent activators of human RNase L. Bioorganic & Medicinal Chemistry, 2022, Roč. 56, č. February, s.nestránkováno. DOI: 10.1016/j.bmc.2022.116632
Pacheco-Garcia, LJ.; Loginov, D.; Rizzuti, B.; Vaňková, P.; Neira, JL.; Kavan, D.; Mesa-Torres, N.; Guzzi, R.; Man, P.; Pey, AL.; A single evolutionarily divergent mutation determines the different FAD-binding affinities of human and rat NQO1 due to site-specific phosphorylation. FEBS Letters, 2022, Roč. 596, č. 1, s.29-41. DOI: 10.1002/1873-3468.14238
Giacobelli, VG.; Fujishima, K.; Lepšík, M.; Tretyachenko, V.; Kadavá, T.; Makarov, M.; Bednárová, L.; Novák, P.; Hlouchová, K.; In Vitro Evolution Reveals Noncationic Protein-RNA Interaction Mediated by Metal Ions. Molecular Biology and Evolution, 2022, Roč. 39, č. 3, s.nestránkováno. DOI: 10.1093/molbev/msac032
Pacheco-Garcia, JL.; Loginov, DS.; Anoz-Carbonell, E.; Vaňková, P.; Palomino-Morales, R.; Salido, E.; Man, P.; Medina, M.; Naganathan, AN.; Pey, AL.; Allosteric Communication in the Multifunctional and Redox NQO1 Protein Studied by Cavity-Making Mutations. Antioxidants [online], 2022, Roč. 11, č. 6, DOI: 10.3390/antiox11061110
Vavrová, K.; Indra, R.; Pompach, P.; Heger, Z.; Hodek, P.; The impact of individual human cytochrome P450 enzymes on oxidative metabolism of anticancer drug lenvatinib. Biomedicine & Pharmacotherapy, 2022, Roč. 145, č. January, s.nestránkováno. DOI: 10.1016/j.biopha.2021.112391
Martínková, M.; Nová role hemu ve zdraví a nemoci - hemové senzorové proteiny. Chemické listy, 2022, Roč. 116, č. 3, s.163-171. DOI: 10.54779/chl20220163
Remans, K.; Lebendiker, M.; de Sousa Santos Abreu, C.; Maffei, M.; Sellathurai, S.; May, MM.; Vaněk, O.; de Marco, A.; Protein purification strategies must consider downstream applications and individual biological characteristics. Microbial Cell Factories, 2022, Roč. 21, č. 1, s.nestránkováno. DOI: 10.1186/s12934-022-01778-5
Poryvai, A.; Galkin, M.; Shvadchak, V.; Slanina, T.; Red-Shifted Water-Soluble BODIPY Photocages for Visualisation and Controllable Cellular Delivery of Signaling Lipids. Angewandte Chemie - International Edition, 2022, Roč. 61, č. 34, s.nestránkováno. DOI: 10.1002/anie.202205855
Kozlík, P.; Molnárová, K.; Ječmen, T.; Křížek, T.; Bosáková, Z.; Prediction of Intact N-Glycopeptide Retention Time Windows in Hydrophilic Interaction Liquid Chromatography. Molecules, 2022, Roč. 27, č. 12, s.nestránkováno. DOI: 10.3390/molecules27123723
Mondal, ICh.; Galkin, M.; Sharma, S.; Murugan, NA.; Yushchenko, DA.; Girdhar, K.; Karmakar, A.; Mondal, P.; Gaur, P.; Ghosh, S.; Organosulfur/selenium-based Highly Fluorogenic Molecular Probes for Live-Cell Nucleolus Imaging. Chemistry - An Asian Journal, 2022, Roč. 17, č. 7, DOI: 10.1002/asia.202101281
Polák, M.; Yassaghi, G.; Kavan, D.; Filandr, F.; Fiala, J.; Kukačka, Z.; Halada, P.; Loginov, DS.; Novák, P.; Utilization of Fast Photochemical Oxidation of Proteins and Both Bottom-up and Top-down Mass Spectrometry for Structural Characterization of a Transcription Factor–dsDNA Complex. Analytical Chemistry, 2022, Roč. 94, č. 7, s.3203-3210. DOI: 10.1021/acs.analchem.1c04746
Antalíková, J.; Sečová, P.; Michalková, K.; Horovská, Ľ.; Páleníková, V.; Jankovičová, J.; Expression of αV integrin and its potential partners in bull reproductive tissues, germ cells and spermatozoa. International Journal of Biological Macromolecules, 2022, Roč. 209, č. Part A, s.542-551. DOI: 10.1016/j.ijbiomac.2022.04.001
Melvin, E.; Kalaninová, Z.; Shlush, E.; Man, P.; Giladi, M.; Haitin, Y.; TTYH family members form tetrameric complexes at the cell membrane. Communications Biology [online], 2022, Roč. 5, č. 1, DOI: 10.1038/s42003-022-03862-3
Radilová, K.; Zima, V.; Kráľ, M.; Machara, A.; Majer, P.; Hodek, J.; Weber, J.; Brynda, J.; Strmeň, T.; Konvalinka, J.; Kožíšek, M.; Thermodynamic and structural characterization of an optimized peptide-based inhibitor of the influenza polymerase PA-PB1 subunit interaction. Antiviral Research, 2022, Roč. 208, č. December, DOI: 10.1016/j.antiviral.2022.105449
Bláha, J.; Skálová, T.; Kalousková, B.; Skořepa, O.; Cmunt, D.; Grobárová, V.; Pažický, S.; Poláchová, E.; de Sousa Santos Abreu, C.; Stránský, J.; Kovaľ, T.; Dušková, J.; Zhao, Y.; Harlos, K.; Hašek, J.; Dohnálek, J.; Vaněk, O.; Structure of the human NK cell NKR-P1:LLT1 receptor:ligand complex reveals clustering in the immune synapse. Nature Communications [online], 2022, Roč. 13, č. 1, DOI: 10.1038/s41467-022-32577-6
Treťjačenko, V.; Vymětal, J.; Neuwirthová, T.; Vondrášek, J.; Fujishima, K.; Hlouchová, K.; Modern and prebiotic amino acids support distinct structural profiles in proteins. Open Biology, 2022, Roč. 12, č. 6, DOI: 10.1098/rsob.220040
Bělonožníková, K.; Hýsková, V.; Vašková, M.; Křížek, T.; Čokrtová, K.; Vaněk, T.; Halířová, L.; Chudý, M.; Račko Žufić, A.; Ryšlavá, H.; Seed Protection of Solanum lycopersicum with Pythium oligandrum against Alternaria brassicicola and Verticillium albo-atrum. Microorganisms [online], 2022, Roč. 10, č. 7, DOI: 10.3390/microorganisms10071348
Loginov, DS.; Fiala, J.; Brechlin, P.; Kruppa, G.; Novák, P.; Hydroxyl radical footprinting analysis of a human haptoglobin-hemoglobin complex. Biochimica et Biophysica Acta - Proteins and Proteomics, 2022, Roč. 1870, č. 2, DOI: 10.1016/j.bbapap.2021.140735
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Janisova, L.; Gruzinov, A.; Zaborova, OV.; Velychkivska, N.; Vaněk, O.; Chytil, P.; Etrych, T.; Janoušková, O.; Zhang, X.; Blanchet, C.; Papadakis, ChM.; Svergun, DI.; Filippov, SK.; Molecular Mechanisms of the Interactions of N-(2-Hydroxypropyl)methacrylamide Copolymers Designed for Cancer Therapy with Blood Plasma Proteins. Pharmaceutics, 2020, Roč. 12, č. 2, s.nestránkováno. DOI: 10.3390/pharmaceutics12020106
Indra, R.; Vavrová, K.; Pompach, P.; Heger, Z.; Hodek, P.; Identification of Enzymes Oxidizing the Tyrosine Kinase Inhibitor Cabozantinib: Cabozantinib Is Predominantly Oxidized by CYP3A4 and Its Oxidation Is Stimulated by cyt b(5) Activity. Biomedicines [online], 2020, Roč. 8, č. 12, s.nestránkováno. DOI: 10.3390/biomedicines8120547
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Stoszko, M.; Al-Hatmi, AMS.; Skriba, A.; Roling, M.; Ne, E.; Crespo, R.; Mueller, YM.; Najafzadeh, MJ.; Kang, J.; Ptáčková, R.; LeMasters, E.; Biswas, P.; Bertoldi, A.; Kan, TW.; de Crignis, E.; Šulc, M.; Lebbink, L.; Rokx, C.; Verbon, A.; van Ijcken, W.; Katsikis, PD.; Palstra, R.; Havlíček, V.; de Hoog, S.; Mahmoudi, T.; Gliotoxin, identified from a screen of fungal metabolites, disrupts 7SK snRNP, releases P-TEFb, and reverses HIV-1 latency. Science advances [online], 2020, Roč. 6, č. 33, s.nestránkováno. DOI: 10.1126/sciadv.aba6617
Henrichs, V.; Gryčová, L.; Bařinka, C.; Nahácka, Z.; Neužil, J.; Diez, S.; Rohlena, J.; Braun, M.; Lánský, Z.; Mitochondria-adaptor TRAK1 promotes kinesin-1 driven transport in crowded environments. Nature Communications [online], 2020, Roč. 11, č. 1, s.nestránkováno. DOI: 10.1038/s41467-020-16972-5
Potalitsyn, P.; Selicharová, I.; Sršeň, K.; Radosavljevic, J.; Marek, A.; Nováková, K.; Jiráček, J.; Žáková, L.; A radioligand binding assay for the insulin-like growth factor 2 receptor. PLoS One, 2020, Roč. 15, č. 9, s.nestránkováno. DOI: 10.1371/journal.pone.0238393
Kutálková, E.; Hrnčiřík, J.; Witasek, R.; Ingr, M.; Effect of solvent and ions on the structure and dynamics of a hyaluronan molecule. Carbohydrate Polymers, 2020, Roč. 234, č. April, s.nestránkováno. DOI: 10.1016/j.carbpol.2020.115919
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Bar-El Lisnyansky, M.; Vaňková, P.; Yeheskel, A.; Simhaev, L.; Engel, H.; Man, P.; Haitin, Y.; Giladi, M.; Structural basis of heterotetrameric assembly and disease mutations in the human cis-prenyltransferase complex. Nature Communications [online], 2020, Roč. 11, č. 1, s.nestránkováno. DOI: 10.1038/s41467-020-18970-z
Ustinova, K.; Nováková, Z.; Saito, M.; Meleshin, M.; Mikešová, J.; Kutil, Z.; Baranová, P.; Havlínová, B.; Schutkowski, M.; Matthias, P.; Bařinka, C.; The disordered N-terminus of HDAC6 is a microtubule-binding domain critical for efficient tubulin deacetylation. Journal of Biological Chemistry, 2020, Roč. 295, č. 9, s.2614-2628. DOI: 10.1074/jbc.RA119.011243
Beyerle, J.; Holowatyj, AN.; Haffa, M.; Frei, E.; Gigic, B.; Schrotz-King, P.; Boehm, J.; Habermann, N.; Stiborová, M.; Scherer, D.; Kolsch, T.; Skender, S.; Becker, N.; Herpel, E.; Schneider, M.; Ulrich, A.; Schirmacher, P.; Chang-Claude, J.; Brenner, H.; Hoffmeister, M.; Haug, U.; Owen, RW.; Ulrich, CM.; Expression Patterns of Xenobiotic-Metabolizing Enzymes in Tumor and Adjacent Normal Mucosa Tissues among Patients with Colorectal Cancer: The ColoCare Study. Cancer Epidemiology, Biomarkers & Prevention, 2020, Roč. 29, č. 2, s.460-469. DOI: 10.1158/1055-9965.EPI-19-0449
Dzianová, P.; Asai, S.; Chrudinová, M.; Kosinová, L.; Potalitsyn, P.; Šácha, P.; Hadravová, R.; Selicharová, I.; Kříž, J.; Turkenburg, JP.; Brzozowski, AM.; Jiráček, J.; Žáková, L.; The efficiency of insulin production and its content in insulin-expressing model beta-cells correlate with their Zn(2+) levels. Open Biology, 2020, Roč. 10, č. 10, s.nestránkováno. DOI: 10.1098/rsob.200137
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Vorlová, B.; Sedlák, F.; Kašpárek, P.; Šrámková, K.; Malý, M.; Zámečník, J.; Šácha, P.; Konvalinka, J.; A novel PSMA/GCPII-deficient mouse model shows enlarged seminal vesicles upon aging. Prostate, 2019, Roč. 79, č. 2, s.126-139. DOI: 10.1002/pros.23717
Tesarova, B.; Charousova, M.; Dostalova, S.; Bienko, A.; Kopel, P.; Kruszynski, R.; Hynek, D.; Michalek, P.; Eckschlager, T.; Stiborová, M.; Adam, V.; Heger, Z.; Folic acid-mediated re-shuttling of ferritin receptor specificity towards a selective delivery of highly cytotoxic nickel(II) coordination compounds. International Journal of Biological Macromolecules, 2019, Roč. 126, č. April, s.1099-1111. DOI: 10.1016/j.ijbiomac.2018.12.128
Indra, R.; Černá, T.; Heger, Z.; Hraběta, J.; Wilhelm, M.; Dostalova, S.; Lengálová, A.; Martínková, M.; Adam, V.; Eckschlager, T.; Schmeiser, HH.; Arlt, VM.; Stiborová, M.; Ellipticine-loaded apoferritin nanocarrier retains DNA adduct-based cytochrome P450-facilitated toxicity in neuroblastoma cells. Toxicology, 2019, Roč. 419, č. May, s.40-54. DOI: 10.1016/j.tox.2019.03.009
Strmiska, V.; Michalek, P.; Lackova, Z.; Guran, R.; Krizkova, S.; Vanickova, L.; Zitka, O.; Stiborová, M.; Eckschlager, T.; Klejdus, B.; Pacik, D.; Tvrdikova, E.; Keil, C.; Haase, H.; Adam, V.; Heger, Z.; Sarcosine is a prostate epigenetic modifier that elicits aberrant methylation patterns through the SAMe-Dnmts axis. Molecular Oncology, 2019, Roč. 13, č. 5, s.1002-1017. DOI: 10.1002/1878-0261.12439
Strmiska, V.; Michalek, P.; Eckschlager, T.; Stiborová, M.; Adam, V.; Krizkova, S.; Heger, Z.; Prostate cancer-specific hallmarks of amino acids metabolism: Towards a paradigm of precision medicine. Biochimica et Biophysica Acta - Reviews on Cancer, 2019, Roč. 1871, č. 2, s.248-258. DOI: 10.1016/j.bbcan.2019.01.001
Afitska, K.; Fučíková, A.; Shvadchak, VV.; Yushchenko, DA.; alpha-Synuclein aggregation at low concentrations. Biochimica et Biophysica Acta - Proteins and Proteomics, 2019, Roč. 1867, č. 7-8, s.701-709. DOI: 10.1016/j.bbapap.2019.05.003
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Le, ST.; Malinovská, L.; Vašková, M.; Mező, E.; Kelemen, V.; Borbás, A.; Hodek, P.; Wimmerová, M.; Csávás, M.; Investigation of the Binding Affinity of a Broad Array of l-Fucosides with Six Fucose-Specific Lectins of Bacterial and Fungal Origin. Molecules, 2019, Roč. 24, č. 12, s.nestránkováno. DOI: 10.3390/molecules24122262
Reed, L.; Indra, R.; Mrízová, I.; Moserová, M.; Schmeiser, HH.; Wolf, ChR.; Henderson, CJ.; Stiborová, M.; Phillips, DH.; Arlt, VM.; Application of hepatic cytochrome b(5)/P450 reductase null (HBRN) mice to study the role of cytochrome b(5) in the cytochrome P450-mediated bioactivation of the anticancer drug ellipticine. Toxicology and Applied Pharmacology, 2019, Roč. 366, č. 1 March 2019, s.64-74. DOI: 10.1016/j.taap.2019.01.020
Leontovyčová, H.; Kalachova, T.; Trdá, L.; Pospíchalová, R.; Lamparová, L.; Dobrev, PI.; Malínská, K.; Burketová, L.; Valentová, O.; Janda, M.; Actin depolymerization is able to increase plant resistance against pathogens via activation of salicylic acid signalling pathway. Scientific Reports, 2019, Roč. 9, č. 1, s.nestránkováno. DOI: 10.1038/s41598-019-46465-5
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Staněk, O.; Mašín, J.; Osička, R.; Jurnečka, D.; Osičková, A.; Šebo, P.; Rapid Purification of Endotoxin-Free RTX Toxins. Toxins, 2019, Roč. 11, č. 6, s.nestránkováno. DOI: 10.3390/toxins11060336
Kalachova, T.; Leontovyčová, H.; Iakovenko, O.; Pospíchalová, R.; Maršík, P.; Klouček, P.; Janda, M.; Valentová, O.; Kocourková, D.; Martinec, J.; Burketová, L.; Ruelland, E.; Interplay between phosphoinositides and actin cytoskeleton in the regulation of immunity related responses in Arabidopsis thaliana seedlings. Environmental and Experimental Botany, 2019, Roč. 167, č. November, s.nestránkováno. DOI: 10.1016/j.envexpbot.2019.103867
Lengálová, A.; Fojtíková-Prošková, V.; Vávra, J.; Martínek, V.; Stráňava, M.; Shimizu, T.; Martínková, M.; Kinetic analysis of a globin-coupled diguanylate cyclase, YddV: Effects of heme iron redox state, axial ligands, and heme distal mutations on catalysis. Journal of Inorganic Biochemistry, 2019, Roč. 201, č. December, s.nestránkováno. DOI: 10.1016/j.jinorgbio.2019.110833
Vít, O.; Harant, K.; Klener, P.; Man, P.; Petrák, J.; A three-pronged "Pitchfork" strategy enables an extensive description of the human membrane proteome and the identification of missing proteins. Journal of Proteomics, 2019, Roč. 204, č. July, s.nestránkováno. DOI: 10.1016/j.jprot.2019.103411
Shimizu, T.; Lengálová, A.; Martínek, V.; Martínková, M.; Heme: Emergent roles of heme in signal transduction, functional regulation and as catalytic centres. Chemical Society Reviews, 2019, Roč. 48, č. 24, s.5624-5657. DOI: 10.1039/c9cs00268e
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Malinovská, L.; Le, ST.; Herczeg, M.; Vašková, M.; Houser, J.; Fujdiarová, E.; Komárek, J.; Hodek, P.; Borbás, A.; Wimmerová, M.; Csávás, M.; Synthesis of beta-d-galactopyranoside-Presenting Glycoclusters, Investigation of Their Interactions with Pseudomonas aeruginosa Lectin A (PA-IL) and Evaluation of Their Anti-Adhesion Potential. Biomolecules, 2019, Roč. 9, č. 11, s.nestránkováno. DOI: 10.3390/biom9110686
Sborchia, M.; De Prez, EG.; Antoine, M.; Bienfait, L.; Indra, R.; Valbuena, G.; Phillips, DH.; Nortier, JL.; Stiborová, M.; Keun, HCh.; Arlt, VM.; The impact of p53 on aristolochic acid I-induced nephrotoxicity and DNA damage in vivo and in vitro. Archives of Toxicology, 2019, Roč. 93, č. 11, s.3345-3366. DOI: 10.1007/s00204-019-02578-4
Slavata, L.; Chmelík, J.; Kavan, D.; Filandrová, R.; Fiala, J.; Rosůlek, M.; Mrázek, H.; Kukačka, Z.; Vališ, K.; Man, P.; Miller, M.; McIntyre, W.; Fabris, D.; Novák, P.; MS-Based Approaches Enable the Structural Characterization of Transcription Factor/DNA Response Element Complex. Biomolecules, 2019, Roč. 9, č. 10, s.nestránkováno. DOI: 10.3390/biom9100535
Man, P.; Fábry, M.; Sieglová, I.; Kavan, D.; Novák, P.; Hnízda, A.; Thiopurine intolerance-causing mutations in NUDT15 induce temperature-dependent destabilization of the catalytic site. Biochimica et Biophysica Acta - Proteins and Proteomics, 2019, Roč. 1867, č. 4, s.376-381. DOI: 10.1016/j.bbapap.2019.01.006
Möller, IR.; Slivacka, M.; Hausner, J.; Nielsen, AK.; Pospíšilová, E.; Merkle, PS.; Lišková, R.; Polák, M.; Loland, CJ.; Kádek, A.; Man, P.; Rand, KD.; Improving the Sequence Coverage of Integral Membrane Proteins during Hydrogen/Deuterium Exchange Mass Spectrometry Experiments. Analytical Chemistry, 2019, Roč. 91, č. 17, s.10970-10978. DOI: 10.1021/acs.analchem.9b00973
Rosůlek, M.; Darebná, P.; Pompach, P.; Slavata, L.; Novák, P.; Proteases Immobilization for In Situ Time-Limited Proteolysis on MALDI Chips. Catalysts [online], 2019, Roč. 9, č. 10, s.nestránkováno. DOI: 10.3390/catal9100833
Sumová, P.; Šíma, M.; Kalousková, B.; Polanská, N.; Vaněk, O.; Oliveira, F.; Valenzuela, JG.; Volf, P.; Amine-binding properties of salivary yellow-related proteins in phlebotomine sand flies. Insect Biochemistry and Molecular Biology, 2019, Roč. 115, č. December, s.nestránkováno. DOI: 10.1016/j.ibmb.2019.103245
Willen, LAA.; Leštinová, T.; Kalousková, B.; Sumová, P.; Spitzová, T.; Velez, R.; Domenech, E.; Vaněk, O.; Gállego, M.; Mertens, P.; Volf, P.; Field study of the improved rapid sand fly exposure test in areas endemic for canine leishmaniasis. PLoS Neglected Tropical Diseases [online], 2019, Roč. 13, č. 11, s.nestránkováno. DOI: 10.1371/journal.pntd.0007832
Kyriukha, YA.; Afitska, K.; Kurochka, AS.; Sachan, S.; Galkin, M.; Yushchenko, DA.; Shvadchak, VV.; alpha-Synuclein Dimers as Potent Inhibitors of Fibrillization. Journal of Medicinal Chemistry, 2019, Roč. 62, č. 22, s.10342-10351. DOI: 10.1021/acs.jmedchem.9b01400
Vaňková, P.; Salido, E.; Timson, DJ.; Man, P.; Pey, AL.; A Dynamic Core in Human NQO1 Controls the Functional and Stability Effects of Ligand Binding and Their Communication across the Enzyme Dimer. Biomolecules, 2019, Roč. 9, č. 11, s.nestránkováno. DOI: 10.3390/biom9110728
Pospíšilová, K.; Knedlík, T.; Šácha, P.; Kostka, L.; Schimer, J.; Brynda, J.; Král, V.; Cígler, P.; Navrátil, V.; Etrych, T.; Šubr, V.; Kugler, M.; Fábry, M.; Řezáčová, P.; Konvalinka, J.; Inhibitor-Polymer Conjugates as a Versatile Tool for Detection and Visualization of Cancer-Associated Carbonic Anhydrase Isoforms. ACS Omega [online], 2019, Roč. 4, č. 4, s.6746-6756. DOI: 10.1021/acsomega.9b00596
Vorlová, B.; Knedlík, T.; Tykvart, J.; Konvalinka, J.; GCPII and its close homolog GCPIII: From a neuropeptidase to a cancer marker and beyond. Frontiers in Bioscience - Landmark, 2019, Roč. 24, č. 4, s.648-687. DOI: 10.2741/4742
Nováková, J.; Talacko, P.; Novák, P.; Vališ, K.; The MEK-ERK-MST1 Axis Potentiates the Activation of the Extrinsic Apoptotic Pathway during GDC-0941 Treatment in Jurkat T Cells. Cells [online], 2019, Roč. 8, č. 2, s.nestránkováno. DOI: 10.3390/cells8020191
Klocko, AD.; Uesaka, M.; Ormsby, T.; Rountree, MR.; Wiles, ET.; Adhvaryu, KK.; Honda, S.; Selker, EU.; Nucleosome Positioning by an Evolutionarily Conserved Chromatin Remodeler Prevents Aberrant DNA Methylation in Neurospora. Genetics, 2019, Roč. 211, č. 2, s.563-578. DOI: 10.1534/genetics.118.301711
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SOUHRNNÁ VÝZKUMNÁ ZPRÁVA

Ryšlavá, H.; Bělonožníková, K.; Průmyslový výzkum univerzálního ošetření osiva a sadby, které chrání před houbovými, bakteriálními a jinými škůdci. 2019. Projekt TAČR číslo TJ01000451

PATENTY:

Macromolecular conjugates for visualization and separation of proteins and cells. Původce: Šácha, Pavel - Konvalinka, Jan - Schimer, Jiří - Knedlík, Tomáš - Navrátil, Václav - Tykvart, Jan - Sedlák, František - Majer, Pavel - Cígler, Petr - Šubr, Vladimír - Ulbrich, Karel - Strohalm, Jiří. Patent přijatý v zemích: Evropa, Kanada, Singapur, Izrael, Austrálie, USA. Vlastníci patentu: Ústav organické chemie a biochemie AV ČR, Ústav makromolekulární chemie AV ČR a Univerzita Karlova v Praze.

Macromolecular conjugates for isolation, immobilization and visualization of proteins. Původce: Šácha, Pavel - Konvalinka, Jan - Schimer, Jiří - Knedlík, Tomáš - Šubr, Vladimír - Ulbrich, Karel - Strohalm, Jiří. Patent přijatý v zemích: Evropa, Kanada, Singapur, Izrael, Austrálie, USA. Vlastníci patentu: Ústav organické chemie a biochemie AV ČR, Ústav makromolekulární chemie AV ČR a Univerzita Karlova v Praze.

2018

Palyzová, A.; Zahradník, J.; Marešová, H.; Sokolová, L.; Kyslíková, E.; Grulich, M.; Štěpánek, V.; Řezanka, T.; Kyslík, P.; Potential of the strain Raoultella sp. KDF8 for removal of analgesics. Folia Microbiologica, 2018, Roč. 63, č. 3, s.273-282. DOI: 10.1007/s12223-017-0563-2
Chaloupková, Z.; Balzerová, A.; Bařinková, J.; Medříková, Z.; Šácha, P.; Beneš, P.; Ranc, V.; Konvalinka, J.; Zbořil, R.; Label-free determination of prostate specific membrane antigen in human whole blood at nanomolar levels by magnetically assisted surface enhanced Raman spectroscopy. Analytica Chimica Acta, 2018, Roč. 997, č. 2 January 2018, s.44-51. DOI: 10.1016/j.aca.2017.10.008
Křížková, S.; Kepinska, M.; Emri, G.; Eckschlager, T.; Stiborová, M.; Pokorná, P.; Heger, Z.; Adam, V.; An insight into the complex roles of metallothioneins in malignant diseases with emphasis on (sub)isoforms/isoforms and epigenetics phenomena. Pharmacology and Therapeutics, 2018, Roč. 183, č. March 2018, s.90-117. DOI: 10.1016/j.pharmthera.2017.10.004
Rodrigo, MAM.; Strmiska, V.; Horáčková, E.; Buchtelová, H.; Michálek, P.; Stiborová, M.; Eckschlager, T.; Adam, V.; Heger, Z.; Sarcosine influences apoptosis and growth of prostate cells via cell-type specific regulation of distinct sets of genes. Prostate, 2018, Roč. 78, č. 2, s.104-112. DOI: 10.1002/pros.23450
Černá, T.; Hraběta, J.; Eckschlager, T.; Frei, E.; Schmeiser, H.; Arlt, V.; Stiborová, M.; The Histone Deacetylase Inhibitor Valproic Acid Exerts a Synergistic Cytotoxicity with the DNA-Damaging Drug Ellipticine in Neuroblastoma Cells. International Journal of Molecular Sciences, 2018, Roč. 19, č. 1, s.nestránkováno. DOI: 10.3390/ijms19010164
Škerlová, J.; Bláha, J.; Pachl, P.; Hofbauerová, K.; Kukačka, Z.; Man, P.; Pompach, P.; Novák, P.; Otwinowski, Z.; Brynda, J.; Vaněk, O.; Řezáčová, P.; Crystal structure of native beta-N-acetylhexosaminidase isolated from Aspergillus oryzae sheds light onto its substrate specificity, high stability, and regulation by propeptide. FEBS Journal, 2018, Roč. 285, č. 3, s.580-598. DOI: 10.1111/febs.14360
Reed, L.; Mrízová, I.; Bárta, F.; Indra, R.; Moserová, M.; Kopka, K.; Schmeiser, HH.; Wolf, CR.; Henderson, CJ.; Stiborová, M.; Phillips, DH.; Arlt, VM.; Cytochrome b(5) impacts on cytochrome P450-mediated metabolism of benzo[a]pyrene and its DNA adduct formation: studies in hepatic cytochrome b(5)/P450 reductase null (HBRN) mice. Archives of Toxicology, 2018, Roč. 92, č. 4, s.1625-1638. DOI: 10.1007/s00204-018-2162-7
Rodrigo, M.; Dostálová, S.; Buchtelová, H.; Strmiska, V.; Michálek, P.; Křížková, S.; Vícha, A.; Jenčová, P.; Eckschlager, T.; Stiborová, M.; Heger, Z.; Adam, V.; Comparative gene expression profiling of human metallothionein-3 up-regulation in neuroblastoma cells and its impact on susceptibility to cisplatin. Oncotarget, 2018, Roč. 9, č. 4, s.4427-4439. DOI: 10.18632/oncotarget.23333
Baker, S.; Arlt, V.; Indra, R.; Joel, M.; Stiborová, M.; Eardley, I.; Ahmad, N.; Otto, W.; Burger, M.; Rubenwolf, P.; Phillips, D.; Southgate, J.; Differentiation-associated urothelial cytochrome P450 oxidoreductase predicates the xenobiotic-metabolizing activity of "luminal" muscle-invasive bladder cancers. Molecular Carcinogenesis, 2018, Roč. 57, č. 5, s.606-618. DOI: 10.1002/mc.22784
Rozbeský, D.; Rosůlek, M.; Kukačka, Z.; Chmelík, J.; Man, P.; Novák, P.; Impact of Chemical Cross-Linking on Protein Structure and Function. Analytical Chemistry, 2018, Roč. 90, č. 2, s.1104-1113. DOI: 10.1021/acs.analchem.7b02863
Zahradník, J.; Kolenko, P.; Palyzová, A.; Černý, J.; Kolářová, L.; Kyslíková, E.; Marešová, H.; Grulich, M.; Nunvar, J.; Šulc, M.; Kyslík, P.; Schneider, B.; The crystal structure of XdpB, the bacterial old yellow enzyme, in an FMN-free form. PLoS One, 2018, Roč. 13, č. 4, s.nestránkováno. DOI: 10.1371/journal.pone.0195299
Willis, AJ.; Indra, R.; Wohak, LE.; Sozeri, O.; Feser, K.; Mrízová, I.; Phillips, DH.; Stiborová, M.; Arlt, VM.; The impact of chemotherapeutic drugs on the CYP1A1-catalysed metabolism of the environmental carcinogen benzo [a] pyrene: Effects in human colorectal HCT116 TP53( / ), TP53( /-) and TP53(-/-) cells. Toxicology, 2018, Roč. 398-399, č. April 2018, s.1-12. DOI: 10.1016/j.tox.2018.02.006
Zahradník, J.; Nunvář, J.; Pařízková, H.; Kolářová, L.; Palyzová, A.; Marešová, H.; Grulich, M.; Kyslíková, E.; Kyslík, P.; Agrobacterium bohemicum sp. nov. isolated from poppy seed wastes in central Bohemia. Systematic and Applied Microbiology, 2018, Roč. 41, č. 3, s.184-190. DOI: 10.1016/j.syapm.2018.01.003
Stiborová, M.; Dračínská, H.; Bořek Dohalská, L.; Klusoňová, Z.; Holecová, J.; Martínková, M.; Schmeiser, HH.; Arlt, VM.; Exposure to endocrine disruptors 17alpha-ethinylestradiol and estradiol influences cytochrome P450 1A1-mediated genotoxicity of benzo[a]pyrene and expression of this enzyme in rats. Toxicology, 2018, Roč. 400-401, č. MAY 2018, s.48-56. DOI: 10.1016/j.tox.2018.04.001
Jaklová Dytrtová, J.; Straka, M.; Bělonožníková, K.; Jakl, M.; Ryšlavá, H.; Does resveratrol retain its antioxidative properties in wine? Redox behaviour of resveratrol in the presence of Cu(II) and tebuconazole. Food Chemistry, 2018, Roč. 262, č. October 2018, s.221-225. DOI: 10.1016/j.foodchem.2018.04.096
Jurnečka, D.; Man, P.; Šebo, P.; Bumba, L.; Bordetella pertussis and Bordetella bronchiseptica filamentous hemagglutinins are processed at different sites. FEBS Open Bio [online], 2018, Roč. 8, č. 8, s.1256-1266. DOI: 10.1002/2211-5463.12474
Dostalova, S.; Polanska, H.; Svobodova, M.; Balvan, J.; Krystofova, O.; Haddad, Y.; Krizkova, S.; Masarik, M.; Eckschlager, T.; Stiborová, M.; Heger, Z.; Adam, V.; Prostate-Specific Membrane Antigen-Targeted Site-Directed Antibody-Conjugated Apoferritin Nanovehicle Favorably Influences In Vivo Side Effects of Doxorubicin. Scientific Reports, 2018, Roč. 8, č. June, s.nestránkováno. DOI: 10.1038/s41598-018-26772-z
Štáfková, J.; Rada, P.; Meloni, D.; Žárský, V.; Smutná, T.; Zimmann, N.; Harant, K.; Pompach, P.; Hrdý, I.; Tachezy, J.; Dynamic secretome of Trichomonas vaginalis: Case study of beta-amylases. Molecular and Cellular Proteomics, 2018, Roč. 17, č. 2, s.304-320. DOI: 10.1074/mcp.RA117.000434
Benešová, L.; Belšánová, B.; Kramář, F.; Hálková, T.; Beneš, V.; Minárik, M.; Application of denaturing capillary electrophoresis for the detection of prognostic mutations in isocitrate dehydrogenase 1 and isocitrate dehydrogenase 2 genes in brain tumors. Journal of Separation Science, 2018, Roč. 41, č. 13, s.2819-2827. DOI: 10.1002/jssc.201701473
Cechová, K.; Hloušková, M.; Javorková, E.; Roubalová, L.; Ujčíková, H.; Holáň, V.; Svoboda, P.; Up-regulation of mu-, delta- and kappa-opioid receptors in concanavalin A-stimulated rat spleen lymphocytes. Journal of Neuroimmunology, 2018, Roč. 321, č. August 2018, s.12-23. DOI: 10.1016/j.jneuroim.2018.05.008
Škrlec, K.; Zadravec, P.; Hlavničková, M.; Kuchař, M.; Vaňková, L.; Petroková, H.; Křížová, L.; Černý, J.; Berlec, A.; Malý, P.; p19-targeting ILP protein blockers of IL-23/Th-17 pro-inflammatory axis displayed on engineered bacteria of food origin. International Journal of Molecular Sciences, 2018, Roč. 19, č. 7, s.nestránkováno. DOI: 10.3390/ijms19071933
Holáň, V.; Cechová, K.; Zajícová, A.; Kössl, J.; Heřmánková, B.; Boháčová, P.; Hájková, M.; Krulová, M.; Svoboda, P.; Javorková, E.; The Impact of Morphine on the Characteristics and Function Properties of Human Mesenchymal Stem Cells. Stem Cell Reviews and Reports, 2018, Roč. 14, č. 6, s.801-811. DOI: 10.1007/s12015-018-9843-8
Hánová, I.; Brynda, J.; Houštecká, R.; Alam, N.; Sojka, D.; Kopáček, P.; Marešová, L.; Vondrášek, J.; Horn, M.; Schueler-Furman, O.; Mareš, M.; Novel Structural Mechanism of Allosteric Regulation of Aspartic Peptidases via an Evolutionarily Conserved Exosite. Cell Chemical Biology, 2018, Roč. 25, č. 3, s.318-329. DOI: 10.1016/j.chembiol.2018.01.001
Horn, M.; Žbodáková, O.; Kašpárek, P.; Srp, J.; Hanečková, R.; Hradilek, M.; Mareš, M.; Sedláček, R.; Profiling system for skin kallikrein proteolysis applied in gene-deficient mouse models. Biological Chemistry, 2018, Roč. 399, č. 9 Special Issue, s.1085-1089. DOI: 10.1515/hsz-2018-0116
Hodek, O.; Křížek, T.; Coufal, P.; Ryšlavá, H.; Online screening of alpha-amylase inhibitors by capillary electrophoresis. Analytical and Bioanalytical Chemistry, 2018, Roč. 410, č. 17, s.4213-4218. DOI: 10.1007/s00216-018-1073-z
Darebná, P.; Špička, J.; Kučera, R.; Topolčan, O.; Navrátilová, E.; Růžička, V.; Volný, M.; Novák, P.; Pompach, P.; Detection and Quantification of Carbohydrate-Deficient Transferrin by MALDI-Compatible Protein Chips Prepared by Ambient Ion Soft Landing. Clinical Chemistry, 2018, Roč. 64, č. 9, s.1319-1326. DOI: 10.1373/clinchem.2017.285452
Humpolíčková, J.; Weber, J.; Starková, J.; Mašínová, E.; Gunterová, J.; Flaisigová, I.; Konvalinka, J.; Majerová, T.; Inhibition of the precursor and mature forms of HIV-1 protease as a tool for drug evaluation. Scientific Reports, 2018, Roč. 8, č. July 2018, s.nestránkováno. DOI: 10.1038/s41598-018-28638-w
Pokorná, J.; Pachl, P.; Karlukova, E.; Hejdánek, J.; Řezáčová, P.; Machara, A.; Hudlicky, JR.; Konvalinka, J.; Kožíšek, M.; Kinetic, Thermodynamic, and Structural Analysis of Drug Resistance Mutations in Neuraminidase from the 2009 Pandemic Influenza Virus. Viruses, 2018, Roč. 10, č. 7, s.nestránkováno. DOI: 10.3390/v10070339
Neburková, J.; Sedlák, F.; Žáčková Suchanová, J.; Kostka, L.; Šácha, P.; Šubr, V.; Etrych, T.; Šimon, P.; Bařinková, J.; Kryštůfek, R.; Španielová, H.; Forstová, J.; Konvalinka, J.; Cígler, P.; Inhibitor-GCPII Interaction: Selective and Robust System for Targeting Cancer Cells with Structurally Diverse Nanoparticles. Molecular Pharmaceutics, 2018, Roč. 15, č. 8, s.2932-2945. DOI: 10.1021/acs.molpharmaceut.7b00889
Kolárik, M.; Indra, R.; Adam, V.; Heger, Z.; Kopečková, K.; Arlt, VM.; Stiborová, M.; Tyrosine kinase inhibitors vandetanib, lenvatinib and cabozantinib modulate oxidation of an anticancer agent ellipticine catalyzed by cytochromes P450 in vitro. Neuroendocrinology Letters, 2018, Roč. 39, , s.101-110.
Ptáček, J.; Nedvědová, J.; Navrátil, M.; Havlínová, B.; Konvalinka, J.; Bařinka, C.; The calcium-binding site of human glutamate carboxypeptidase II is critical for dimerization, thermal stability, and enzymatic activity. Protein Science, 2018, Roč. 27, č. 9, s.1575-1584. DOI: 10.1002/pro.3460
Osičková, A.; Balashova, N.; Mašín, J.; Šulc, M.; Röderová, J.; Wald, T.; Brow, A.; Koufos, E.; Chang, E.; Giannakakis, A.; Lally, E.; Osička, R.; Cytotoxic activity of Kingella kingae RtxA toxin depends on post-translational acylation of lysine residues and cholesterol binding. Emerging Microbes and Infections, 2018, Roč. 7, č. 1 (listopad 2018), s.nestránkováno. DOI: 10.1038/s41426-018-0179-x
Stiborová, M.; Formation of Covalent DNA Adducts by Enzymatically Activated Carcinogens and Drugs In Vitro and Their Determination by P-32-postlabeling. JoVE: Journal of Visualized Experiments, 2018, Roč. 2018, č. 133, s.nestránkováno. DOI: 10.3791/57177
Šimon, P.; Knedlík, T.; Blažková, K.; Dvořáková, P.; Březinová, A.; Kostka, L.; Šubr, V.; Konvalinka, J.; Šácha, P.; Identification of Protein Targets of Bioactive Small Molecules Using Randomly Photomodified Probes. ACS chemical biology, 2018, Roč. 13, č. 12, s.3333-3342. DOI: 10.1021/acschembio.8b00791
Bicocca, V.; Ormsby, T.; Adhvaryu, K.; Honda, S.; Selker, E.; ASH1-catalyzed H3K36 methylation drives gene repression and marks H3K27me2/3-competent chromatin. eLife, 2018, Roč. 7, č. November 2018, s.nestránkováno. DOI: 10.7554/eLife.41497
Shvadchak, VV.; Afitska, K.; Yushchenko, DA.; Inhibition of α-Synuclein Amyloid Fibril Elongation by Blocking Fibril Ends. Angewandte Chemie - International Edition, 2018, Roč. 57, č. 20, s.5690-5694. DOI: 10.1002/anie.201801071
Macháčková, K.; Chrudinová, M.; Radosavljević, J.; Potalitsyn, P.; Křížková, K.; Fábry, M.; Selicharová, I.; Collinsová, M.; Brzozowski, AM.; Žáková, L.; Jiráček, J.; Converting Insulin-like Growth Factors 1 and 2 into High-Affinity Ligands for Insulin Receptor Isoform A by the Introduction of an Evolutionarily Divergent Mutation. Biochemistry, 2018, Roč. 57, č. 16, s.2373-2382. DOI: 10.1021/acs.biochem.7b01260
Fabre, B.; Pícha, J.; Selicharová, I.; Žáková, L.; Chrudinová, M.; Hajduch, J.; Jiráček, J.; Probing tripodal peptide scaffolds as insulin and IGF-1 receptor ligands. European Journal of Organic Chemistry, 2018, Roč. 2018, č. 37 (Special Issue), s.5193-5201. DOI: 10.1002/ejoc.201800606
Oikonomidi, I.; Burbridge, E.; Cavadas, M.; Sullivan, G.; Collis, B.; Naegele, H.; Clancy, D.; Březinová, J.; Hu, T.; Bileck, A.; Gerner, C.; Bolado, A.; von Kriegsheim, A.; Martin, SJ.; Steinberg, F.; Stříšovský, K.; Adrain, C.; iTAP, a novel iRhom interactor, controls TNF secretion by policing the stability of iRhom/TACE. eLife, 2018, Roč. 7, č. Jun 2018, s.nestránkováno. DOI: 10.7554/eLife.35032
Zahradník, J.; Kolářová, L.; Pařízková, H.; Kolenko, P.; Schneider, B.; Interferons type II and their receptors R1 and R2 in fish species: Evolution, structure, and function. Fish and Shellfish Immunology, 2018, Roč. 79, č. August 2018, s.140-152. DOI: 10.1016/j.fsi.2018.05.008
Semerádtová, A.; Stofik, M.; Vaňková, L.; Malý, P.; Staněk, O.; Malý, J.; Optical microchips based on high-affinity recombinant protein binders-Human serum albumin detection in urine. Sensors and Actuators B: Chemical, 2018, Roč. 272, č. November 2018, s.441-447. DOI: 10.1016/j.snb.2018.05.180
Chrudinová, M.; Žáková, L.; Marek, Socha, O.; Buděšínský, M.; Hubálek, Pícha, J.; Macháčková, K.; Jiráček, J.; Selicharová, I.; A versatile insulin analog with high potency for both insulin and insulin-like growth factor 1 receptors: Structural implications for receptor binding. Journal of Biological Chemistry, 2018, Roč. 293, č. 43, s.16818-16829. DOI: 10.1074/jbc.RA118.004852
Frolíková, M.; Maňásková-Postlerová, P.; Černý, J.; Jankovičová, J.; Šimoník, O.; Pohlová, A.; Sečová, P.; Antalíkova, J.; Dvořáková-Hortová, K.; CD9 and CD81 Interactions and Their Structural Modelling in Sperm Prior to Fertilization. International Journal of Molecular Sciences, 2018, Roč. 19, č. 4, s.nestránkováno. DOI: 10.3390/ijms19041236
Smidova, A.; Alblova, M.; Kalábová, D.; Pšenáková, K.; Rosůlek, M.; Heřman, P.; Obšil, T.; Obsilova, V.; 14-3-3 protein masks the nuclear localization sequence of caspase-2. FEBS Journal, 2018, Roč. 285, č. 22, s.4196-4213. DOI: 10.1111/febs.14670
Valentová, K.; Purchartová, K.; Rydlová, L.; Roubalová, L.; Biedermann, D.; Petrásková, L.; Křenková, A.; Pelantová, H.; Holečková-Moravcová, V.; Tesařová, E.; Cvačka, J.; Vrba, J.; Ulrichová, J.; Křen, V.; Sulfated Metabolites of Flavonolignans and 2,3-Dehydroflavonolignans: Preparation and Properties. International Journal of Molecular Sciences, 2018, Roč. 19, č. 8, s.nestránkováno. DOI: 10.3390/ijms19082349
Barchánková, L.; Mertlíková‑Kaiserová, H.; Hájek, Mitochondriální toxicita indukovaná léčivy. Bioprospect, 2018, Roč. 28, č. 2, s.40-47.

2017

Arlt, VM.; Meinl, W.; Florian, S.; Nagy, E.; Bárta, F.; Thomann, M.; Mrízová, I.; Krais, AM.; Liu, M.; Richards, M.; Mirza, A.; Kopka, K.; Phillips, DH.; Glatt, H.; Stiborová, M.; Schmeiser, HH.; Impact of genetic modulation of SULT1A enzymes on DNA adduct formation by aristolochic acids and 3-nitrobenzanthrone. Archives of Toxicology, 2017, Roč. 91, č. 4, s.1957-1975. DOI: 10.1007/s00204-016-1808-6
Horníková, L.; Fraiberk, M.; Man, P.; Janovec, V.; Forstová, J.; VP1, the major capsid protein of the mouse polyomavirus, binds microtubules, promotes their acetylation and blocks the host cell cycle. FEBS Journal, 2017, Roč. 284, č. 2, s.301-323. DOI: 10.1111/febs.13977
Dostalova, S.; Vasickova, K.; Hynek, D.; Krizkova, S.; Richtera, L.; Vaculovicova, M.; Eckschlager, T.; Stiborová, M.; Heger, Z.; Adam, V.; Apoferritin as an ubiquitous nanocarrier with excellent shelf life. International Journal of Nanomedicine [online], 2017, Roč. 12, č. March, s.2265-2278. DOI: 10.2147/IJN.S130267
Bláha, J.; Kalousková, B.; Skořepa, O.; Pažický, S.; Novák, P.; Vaněk, O.; High-level expression and purification of soluble form of human natural killer cell receptor NKR-P1 in HEK293S GnTI- cells. Protein Expression and Purification, 2017, Roč. 140, č. December 2017, s.36-43. DOI: 10.1016/j.pep.2017.07.016
Wald, T.; Špoutil, F.; Osičková, A.; Procházková, M.; Benada, O.; Kašpárek, P.; Bumba, L.; Klein, O.; Sedláček, R.; Šebo, P.; Procházka, J.; Osička, R.; Intrinsically disordered proteins drive enamel formation via an evolutionarily conserved self-assembly motif. Proceedings of the National Academy of Sciences of the United States of America, 2017, Roč. 114, č. 9, s.E1641-E1650. DOI: 10.1073/pnas.1615334114
Tichá, A.; Stanchev, S.; Škerle, J.; Began, J.; Ingr, M.; Švehlová, K.; Polovinkin, L.; Růžička, M.; Bednárová, L.; Hadravová, R.; Poláchová, E.; Rampírová, P.; Březinová, J.; Kašička, V.; Majer, P.; Strisovsky, K.; Sensitive Versatile Fluorogenic Transmembrane Peptide Substrates for Rhomboid Intramembrane Proteases. Journal of Biological Chemistry, 2017, Roč. 292, č. 7, s.2703-2713. DOI: 10.1074/jbc.M116.762849
Afitska, K.; Fučíková, A.; Shvadchak, VV.; Yushchenko, DA.; Modification of C-Terminus Provides New Insights into the Mechanism of a-Synuclein Aggregation. Biophysical Journal, 2017, Roč. 113, č. 10, s.2182-2191. DOI: 10.1016/j.bpj.2017.08.027
Shvadchak, VV.; Kucherak, O.; Afitska, K.; Dziuba, D.; Yushchenko, DA.; Environmentally sensitive probes for monitoring protein-membrane interactions at nanomolar concentrations. Biochimica et Biophysica Acta - Biomembranes, 2017, Roč. 1859, č. 5, s.852-859. DOI: 10.1016/j.bbamem.2017.01.021
Tupec, M.; Hýsková, V.; Bělonožníková, K.; Hraníček, J.; Červený, V.; Ryšlavá, H.; Characterization of some potential medicinal plants from Central Europe by their antioxidant capacity and the presence of metal elements. Food Bioscience, 2017, Roč. 20, č. December 2017, s.43-50. DOI: 10.1016/j.fbio.2017.08.001
Tupec, M.; Buček, A.; Valterová, I.; Pichová, I.; Biotechnological potential of insect fatty acid-modifying enzymes. Zeitschrift für Naturforschung - Section C Journal of Biosciences, 2017, Roč. 72, č. 9-10, s.387-403. DOI: 10.1515/znc-2017-0031
Palivec, V.; Viola, CM.; Kozak, M.; Ganderton, TR.; Křížková, K.; Turkenburg, JP.; Halušková, P.; Žáková, L.; Jiráček, J.; Jungwirth, P.; Brzozowski, AM.; Computational and structural evidence for neurotransmitter-mediated modulation of the oligomeric states of human insulin in storage granules. Journal of Biological Chemistry, 2017, Roč. 292, č. 20, s.8342-8355. DOI: 10.1074/jbc.M117.775924
Mináriková, M.; Fojtíková, V.; Vyskočilová, E.; Sedláček, J.; Šikut, M.; Bořek Dohalská, L.; Stiborová, M.; Martínková, M.; The capacity and effectiveness of diosmectite and charcoal in trapping the compounds causing the most frequent intoxications in acute medicine: A comparative study. Environmental Toxicology and Pharmacology, 2017, Roč. 52, č. Jun 2017, s.214-220. DOI: 10.1016/j.etap.2017.04.011
Johnson, N.; Březinová, J.; Stephens, E.; Burbridge, E.; Freeman, M.; Adrain, C.; Stříšovský, K.; Quantitative proteomics screen identifies a substrate repertoire of rhomboid protease RHBDL2 in human cells and implicates it in epithelial homeostasis. Scientific Reports, 2017, Roč. 7, č. AUGUST 4 2017, s.nestránkováno. DOI: 10.1038/s41598-017-07556-3
Darebná, P.; Novák, P.; Kučera, R.; Topolčan, O.; Sanda, M.; Goldman, R.; Pompach, P.; Changes in the expression of N- and O-glycopeptides in patients with colorectal cancer and hepatocellular carcinoma quantified by full-MS scan FT-ICR and multiple reaction monitoring. Journal of Proteomics, 2017, Roč. 153, č. FEB 2017; Special Issue: SI, s.44-52. DOI: 10.1016/j.jprot.2016.09.004
Pícha, J.; Buděšínský, M.; Macháčková, K.; Collinsová, M.; Jiráček, J.; Optimized syntheses of Fmoc azido amino acids for the preparation of azidopeptides. Journal of Peptide Science, 2017, Roč. 23, č. 3, s.202-214. DOI: 10.1002/psc.2968
Navrátil, V.; Schimer, J.; Tykvart, J.; Knedlík, T.; Vik, V.; Majer, P.; Konvalinka, J.; Šácha, P.; DNA-linked Inhibitor Antibody Assay (DIANA) for sensitive and selective enzyme detection and inhibitor screening. Nucleic Acids Research, 2017, Roč. 45, č. 2, s.nestránkováno. DOI: 10.1093/nar/gkw853
Burianová, I.; Kuželová, K.; Mitrovský, O.; Stöckbauer, P.; Žáčková, M.; Špička, I.; Histone deacetylase inhibitors in plasma cell leukemia treatment: effect of bone marrow microenvironment. Neoplasma, 2017, Roč. 64, č. 2, s.228-239. DOI: 10.4149/neo_2017_209
Kubíčková, B.; Hadrabová, J.; Vašková, L.; Mandys, V.; Stiborová, M.; Hodek, P.; Susceptibility of airways to Pseudomonas aeruginosa infection - mouse neuraminidase model. Monatshefte für Chemie - Chemical Monthly, 2017, Roč. 148, č. 11, s.1993-2002. DOI: 10.1007/s00706-017-2035-4
Knedlík, T.; Vorlová, B.; Navrátil, V.; Tykvart, J.; Sedlák, F.; Vaculín, Š.; Franěk, M.; Šácha, P.; Konvalinka, J.; Mouse glutamate carboxypeptidase II (GCPII) has a similar enzyme activity and inhibition profile but a different tissue distribution to human GCPII. FEBS Open Bio [online], 2017, Roč. 7, č. 9, s.1362-1378. DOI: 10.1002/2211-5463.12276
Škultétyová, Ľ.; Ustinova, K.; Kutil, Z.; Nováková, Z.; Pavlíček, J.; Mikešová, J.; Trapl, D.; Baranová, P.; Havlínová, B.; Hubálek, Lánský, Z.; Bařinka, Human histone deacetylase 6 shows strong preference for tubulin dimers over assembled microtubules. Scientific Reports, 2017, Roč. 7, č. September 2017, s.nestránkováno. DOI: 10.1038/s41598-017-11739-3
Zahradník, J.; Plačková, M.; Palyzová, A.; Marešová, H.; Kyslíková, E.; Kyslík, P.; Draft genome sequence of Pantoea agglomerans JM1, a strain isolated from soil polluted by industrial production of beta-lactam antibiotics which exhibits valacyclovir-like hydrolase activity. Genome Announcements [online], 2017, Roč. 5, č. 38, s.nestránkováno. DOI: 10.1128/genomeA.00921-17
Hodek, O.; Křížek, T.; Coufal, P.; Ryšlavá, H.; Design of experiments for amino acid extraction from tobacco leaves and their subsequent determination by capillary zone electrophoresis. Analytical and Bioanalytical Chemistry, 2017, Roč. 409, č. 9, s.2383-2391. DOI: 10.1007/s00216-017-0184-2
Dráb, T.; Ren, Š.; Maňásková-Postlerová, P.; Tichá, M.; Jonáková, V.; Liberda, J.; Glycosidases in porcine follicular fluid and their effect on zona pellucida-AWN 1 spermadhesin interaction. Theriogenology, 2017, Roč. 100, č. September 2017, s.80-87. DOI: 10.1016/j.theriogenology.2017.06.011
Hýsková, V.; Plisková, V.; Červený, V.; Ryšlavá, H.; NADP-dependent enzymes are involved in response to salt and hypoosmotic stress in cucumber plants. General Physiology and Biophysics, 2017, Roč. 36, č. 3, s.247-258. DOI: 10.4149/gpb_2016053
Kopečná-Zapletalová, M.; Krasulová, K.; Anzenbacher, P.; Hodek, P.; Anzenbacherová, E.; Interaction of isoflavonoids with human liver microsomal cytochromes P450: inhibition of CYP enzyme activities. Xenobiotica, 2017, Roč. 47, č. 4, s.324-331. DOI: 10.1080/00498254.2016.1195028
Kádek, A.; Kavan, D.; Marcoux, J.; Stojko, J.; Felice, A.; Cianferani, S.; Ludwig, R.; Halada, P.; Man, P.; Interdomain electron transfer in cellobiose dehydrogenase is governed by surface electrostatics. Biochimica et Biophysica Acta - General Subjects, 2017, Roč. 1861, č. 2, s.157-167. DOI: 10.1016/j.bbagen.2016.11.016
Giladi, M.; van Dijk, L.; Refaeli, B.; Almagor, L.; Hiller, R.; Man, P.; Forest, E.; Khananshvili, D.; Dynamic distinctions in the Na /Ca2 exchanger adopting the inward- and outward-facing conformational states. Journal of Biological Chemistry, 2017, Roč. 292, č. 29, s.12311-12323. DOI: 10.1074/jbc.M117.787168
Kacířová, M.; Nováček, J.; Man, P.; Obšilová, V.; Obšil, T.; Structural Basis for the 14-3-3 Protein-Dependent Inhibition of Phosducin Function. Biophysical Journal, 2017, Roč. 112, č. 7, s.1339-1349. DOI: 10.1016/j.bpj.2017.02.036
Schradert, C.; Lee, L.; Rey, M.; Sarpe, V.; Man, P.; Sharma, S.; Zabrouskov, V.; Larsen, B.; Schriemer, D.; Neprosin, a Selective Prolyl Endoprotease for Bottom-up Proteomics and Histone Mapping. Molecular and Cellular Proteomics, 2017, Roč. 16, č. 6, s.1162-1171. DOI: 10.1074/mcp.M116.066803
Eckschlager, T.; Plch, J.; Stiborová, M.; Hraběta, J.; Histone Deacetylase Inhibitors as Anticancer Drugs. International Journal of Molecular Sciences, 2017, Roč. 18, č. 7, s.nestránkováno. DOI: 10.3390/ijms18071414
Martínek, V.; Bárta, F.; Hodek, P.; Frei, E.; Schmeiser, H.; Arlt, V.; Stiborová, M.; Comparison of the oxidation of carcinogenic aristolochic acid I and II by microsomal cytochromes P450 in vitro: experimental and theoretical approaches. Monatshefte für Chemie - Chemical Monthly, 2017, Roč. 148, č. 11, s.1971-1981. DOI: 10.1007/s00706-017-2014-9
Stiborová, M.; Indra, R.; Moserová, M.; Bořek Dohalská, L.; Hodek, P.; Frei, E.; Kopka, K.; Schmeiser, H.; Arlt, V.; Comparison of human cytochrome P450 1A1-catalysed oxidation of benzo[a]pyrene in prokaryotic and eukaryotic expression systems. Monatshefte für Chemie - Chemical Monthly, 2017, Roč. 148, č. 11, s.1959-1969. DOI: 10.1007/s00706-017-2002-0
Stiborová, M.; Indra, R.; Frei, E.; Kopečková, K.; Schmeiser, H.; Eckschlager, T.; Adam, V.; Heger, Z.; Arlt, V.; Martínek, V.; Cytochrome b(5) plays a dual role in the reaction cycle of cytochrome P450 3A4 during oxidation of the anticancer drug ellipticine. Monatshefte für Chemie - Chemical Monthly, 2017, Roč. 148, č. 11, s.1983-1991. DOI: 10.1007/s00706-017-1986-9
Dvořáková, P.; Bušek, P.; Knedlík, T.; Schimer, J.; Etrych, T.; Kostka, L.; Stollinová Šromová, L.; Šubr, V.; Šácha, P.; Šedo, A.; Konvalinka, J.; Inhibitor-Decorated Polymer Conjugates Targeting Fibroblast Activation Protein. Journal of Medicinal Chemistry, 2017, Roč. 60, č. 20, s.8385-8393. DOI: 10.1021/acs.jmedchem.7b00767
Bebová, M.; Boštíková, Z.; Moserová, M.; Pávek, P.; Anzenbacherová, E.; Stiborová, M.; Hodek, P.; Modulation of xenobiotic conjugation enzymes by dihydromyricetin in rats. Monatshefte für Chemie - Chemical Monthly, 2017, Roč. 148, č. 11, s.2003-2009. DOI: 10.1007/s00706-017-2007-8
Vališ, K.; Grobárová, V.; Hernychová, L.; Bugáňová, M.; Kavan, D.; Kalous, M.; Černý, J.; Stodůlková, E.; Kuzma, M.; Flieger, M.; Černý, J.; Novák, P.; Reprogramming of leukemic cell metabolism through the naphthoquinonic compound Quambalarine B. Oncotarget, 2017, Roč. 8, č. 61, s.103137-103153. DOI: 10.18632/oncotarget.21663
Tarbouriech, N.; Ducournau, C.; Hutin, S.; Mas, P.; Man, P.; Forest, E.; Hart, D.; Peyrefitte, C.; Burmeister, W.; Iseni, F.; The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding. Nature Communications [online], 2017, Roč. 8, č. 1, s.nestránkováno. DOI: 10.1038/s41467-017-01542-z
Kalábová, D.; Šmídová, A.; Petrvalská, O.; Alblová, M.; Košek, D.; Man, P.; Obšil, T.; Obšilová, V.; Human procaspase-2 phosphorylation at both S139 and S164 is required for 14-3-3 binding. Biochemical and Biophysical Research Communications, 2017, Roč. 493, č. 2, s.940-945. DOI: 10.1016/j.bbrc.2017.09.116
Gupta, K.; Wastson, A.; Baptista, T.; Scheer, E.; Chambers, A.; Koehler, C.; Zou, J.; Obong-Ebong, I.; Kandiah, E.; Temblador, A.; Round, A.; Forest, E.; Man, P.; Bienisssek, C.; Laue, E.; Lemke, E.; Rappsilber, J.; Robinson, C.; Devys, D.; Tora, L.; Berger, l.; Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID. eLife, 2017, Roč. 6, č. 7 November 2017, s.nestránkováno. DOI: 10.7554/eLife.30395
Mašín, J.; Röderová, J.; Osičková, A.; Novák, P.; Bumba, L.; Fišer, R.; Šebo, P.; Osička, R.; The conserved tyrosine residue 940 plays a key structural role in membrane interaction of Bordetella adenylate cyclase toxin. Scientific Reports, 2017, Roč. 7, č. AUG 24 2017, s.nestránkováno. DOI: 10.1038/s41598-017-09575-6
Novák, J.; Černý, O.; Osičková, A.; Linhartová, I.; Mašín, J.; Bumba, L.; Šebo, P.; Osička, R.; Structure-Function Relationships Underlying the Capacity of Bordetella Adenylate Cyclase Toxin to Disarm Host Phagocytes. Toxins, 2017, Roč. 9, č. 10, s.nestránkováno. DOI: 10.3390/toxins9100300
Treťjačenko, V.; Vymětal, J.; Bednarova, L.; Kopecký, V.; Hofbauerová, K.; Jindrová, H.; Hubalek, M.; Soucek, R.; Konvalinka, J.; Vondrasek, J.; Hlouchová, K.; Random protein sequences can form defined secondary structures and are well-tolerated in vivo. Scientific Reports, 2017, Roč. 7, č. 1, s.nestránkováno. DOI: 10.1038/s41598-017-15635-8
Stráňava, M.; Man, P.; Skálová, T.; Kolenko, P.; Bláha, J.; Fojtíková, V.; Martínek, V.; Dohnálek, J.; Lengálová, A.; Rosůlek, M.; Shimizu, T.; Martínková, M.; Coordination and redox state-dependent structural changes of the heme-based oxygen sensor AfGcHK associated with intraprotein signal transduction. Journal of Biological Chemistry, 2017, Roč. 292, č. 51, s.20921-20935. DOI: 10.1074/jbc.M117.817023
Stehlík, Š.; Varga, M.; Štenclová, P.; Ondič, L.; Ledinský, M.; Pangrác, J.; Vaněk, O.; Lipov, J.; Kromka, A.; Rezek, B.; Ultrathin Nanocrystalline Diamond Films with Silicon Vacancy Color Centers via Seeding by 2 nm Detonation Nanodiamonds. ACS Applied Materials & Interfaces, 2017, Roč. 9, č. 44, s.38842-38853. DOI: 10.1021/acsami.7b14436
Ujčíková, H.; Hloušková, M.; Cechová, K.; Stolařová, K.; Roubalová, L.; Svoboda, P.; Determination of mu-, delta- and kappa-opioid receptors in forebrain cortex of rats exposed to morphine for 10 days: Comparison with animals after 20 days of morphine withdrawal. PLoS One, 2017, Roč. 12, č. 10, s.nestránkováno. DOI: 10.1371/journal.pone.0186797
Tichá, A.; Stanchev, S.; Vinothkumar, K.; Mikles, D.; Pachl, P.; Began, J.; Škerle, J.; Švehlová, K.; Nguyen, M.; Verhelst, S.; Johnson, D.; Bachovchin, D.; Lepšík, M.; Majer, P.; Stříšovský, K.; General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases. Cell Chemical Biology, 2017, Roč. 24, č. 12, s.1523-1536. DOI: 10.1016/j.chembiol.2017.09.007
Macháčková, K.; Collinsová, M.; Chrudinová, M.; Selicharová, I.; Pícha, J.; Buděšínský, M.; Vaněk, V.; Žáková, L.; Brzozowski, AM.; Jiráček, J.; Insulin-like Growth Factor 1 Analogs Clicked in the C Domain: Chemical Synthesis and Biological Activities. Journal of Medicinal Chemistry, 2017, Roč. 60, č. 24, s.10105-10117. DOI: 10.1021/acs.jmedchem.7b01331
Raudenská, M.; Krejčová, L.; Richtera, L.; Heger, Z.; Hraběta, J.; Eckschlager, T.; Stiborová, M.; Adam, V.; Kratochvílová, M.; Masařík, M.; Gumulec, J.; VPA does not enhance platinum binding to DNA in cisplatin-resistant neuroblastoma cancer cells. Tumor Biology, 2017, Roč. 39, č. 9, s.1-8. DOI: 10.1177/1010428317711656
Šmerková, K.; Vaculovič, T.; Vaculovičová, M.; Kynický, J.; Brtnický, M.; Eckschlager, T.; Stiborová, M.; Hubálek, J.; Adam, V.; DNA interaction with platinum-based cytostatics revealed by DNA sequencing. Analytical Biochemistry, 2017, Roč. 539, č. 29. září 2017, s.22-28. DOI: 10.1016/j.ab.2017.09.018
Stiborová, M.; Arlt, V.; Schmeiser, H.; DNA Adducts Formed by Aristolochic Acid Are Unique Biomarkers of Exposure and Explain the Initiation Phase of Upper Urothelial Cancer. International Journal of Molecular Sciences, 2017, Roč. 18, č. 10, s.nestránkováno. DOI: 10.3390/ijms18102144
Chaloupková, Z.; Balzerová, A.; Bařinková, J.; Medříková, Z.; Šácha, P.; Beneš, P.; Ranc, V.; Konvalinka, J.; Zbořil, R.; Label-free determination of prostate specific membrane antigen in human whole blood at nanomolar levels by magnetically assisted surface enhanced Raman spectroscopy. Analytica Chimica Acta, 2018, Roč. 997, č. 2 January 2018, s.44-51. DOI: 10.1016/j.aca.2017.10.008

2016

Krais, AM.; Speksnijder, EN.; Melis, JPM.; Indra, R.; Moserová, M.; Godschalk, RW.; van Schooten, F.; Seidel, A.; Kopka, K.; Schmeiser, HH.; Stiborová, M.; Phillips, DH.; Luijten, M.; Arlt, VM.; The impact of p53 on DNA damage and metabolic activation of the environmental carcinogen benzo[a]pyrene: effects in Trp53(+/+), Trp53(+/-) and Trp53(-/-) mice. Archives of Toxicology, 2016, Roč. 90, č. 4, s.839-851. DOI: 10.1007/s00204-015-1531-8
Hraběta, J.; Adam, V.; Eckschlager, T.; Frei, E.; Stiborová, M.; Kizek, R.; Metal Containing Cytostatics and Their Interaction with Cellular Thiol Compounds Causing Chemoresistance. Anti-Cancer Agents in Medicinal Chemistry, 2016, Roč. 16, č. 6, s.686-698. DOI: 10.2174/1871520616666151120122611
Heger, Z.; Rodrigo, MAM.; Křížková, S.; Ruttkay-Nedecký, B.; Zalewska, M.; Planells del Pozo, EM.; Pelfrene, A.; Pourrut, B.; Stiborová, M.; Eckschlager, T.; Emri, G.; Kizek, R.; Adam, V.; Metallothionein as a Scavenger of Free Radicals - New Cardioprotective Therapeutic Agent or Initiator of Tumor Chemoresistance?. Current Drug Targets, 2016, Roč. 17, č. 12, s.1438-1451. DOI: 10.2174/1389450116666151001113304
Vašková, L.; Nosková, L.; Bláhová, B.; Wimmerová, M.; Dřevínek, P.; Kubíčková, B.; Stiborová, M.; Hodek, P.; Evaluation of anti-PAIIL lectin hen yolk antibody as an agent inhibiting Pseudomonas aeruginosa adherence to epithelial cells. Monatshefte für Chemie, 2016, Roč. 147, č. 5, s.889-896. DOI: 10.1007/s00706-016-1687-9
Šulc, M.; Indra, R.; Moserová, M.; Schmeiser, H.; Frei, E.; Arlt, V.; Stiborová, M.; The impact of individual cytochrome P450 enzymes on oxidative metabolism of benzo[a]pyrene in human livers. Environmental and Molecular Mutagenesis, 2016, Roč. 57, č. 3, s.229-235. DOI: 10.1002/em.22001
Milichovský, J.; Bárta, F.; Schmeiser, H.; Arlt, V.; Frei, E.; Stiborová, M.; Martínek, V.; Active Site Mutations as a Suitable Tool Contributing to Explain a Mechanism of Aristolochic Acid I Nitroreduction by Cytochromes P450 1A1, 1A2 and 1B1. International Journal of Molecular Sciences, 2016, Roč. 17, č. 2, s.nestránkováno. DOI: 10.3390/ijms17020213
Doležal, M.; Zábranský, A.; Dostál, J.; Vaněk, O.; Brynda, J.; Lepšík, M.; Hadravová, R.; Pichová, I.; Myristoylation drives dimerization of matrix protein from mouse mammary tumor virus. Retrovirology, 2016, Roč. 13, č. 5 January, 2016, s.nestránkováno. DOI: 10.1186/s12977-015-0235-8
Mrízová, I.; Moserová, M.; Milichovský, J.; Šulc, M.; Kizek, R.; Kopečková, K.; Arlt, V.; Stiborová, M.; Heterologous expression of human cytochrome P450 2S1 in Escherichia coli and investigation of its role in metabolism of benzo[a]pyrene and ellipticine. Monatshefte für Chemie, 2016, Roč. 147, č. 5, s.881-888. DOI: 10.1007/s00706-016-1738-2
Stiborová, M.; Moserová, M.; Mrízová, I.; Dračínská, H.; Martínek, V.; Indra, R.; Frei, E.; Adam, V.; Kizek, R.; Schmeiser, H.; Kubáčková, K.; Arlt, V.; Induced expression of microsomal cytochrome b(5) determined at mRNA and protein levels in rats exposed to ellipticine, benzo[a]pyrene, and 1-phenylazo-2-naphthol (Sudan I). Monatshefte für Chemie, 2016, Roč. 147, č. 5, s.897-904. DOI: 10.1007/s00706-015-1636-z
Heger, Z.; Gumulec, J.; Cernei, N.; Polanska, H.; Raudenska, M.; Masarik, M.; Eckschlager, T.; Stiborová, M.; Adam, V.; Kizek, R.; Relation of exposure to amino acids involved in sarcosine metabolic pathway on behavior of non-tumor and malignant prostatic cell lines. Prostate, 2016, Roč. 76, č. 7, s.679-690. DOI: 10.1002/pros.23159
Jeřábek, P.; Florián, J.; Martínek, V.; Membrane-Anchored Cytochrome P450 1A2-Cytochrome b5 Complex Features an X-Shaped Contact between Antiparallel Transmembrane Helices. Chemical Research in Toxicology, 2016, Roč. 29, č. 4, s.626-636. DOI: 10.1021/acs.chemrestox.5b00349
Dračínská, H.; Bárta, F.; Levová, K.; Hudecová, A.; Moserová, M.; Schmeiser, H.; Kopka, K.; Frei, E.; Arlt, V.; Stiborová, M.; Induction of cytochromes P450 1A1 and 1A2 suppresses formation of DNA adducts by carcinogenic aristolochic acid I in rats in vivo. Toxicology, 2016, Roč. 344, č. FEB 2016, s.7-18. DOI: 10.1016/j.tox.2016.01.011
Lambry, J.; Stráňava, M.; Lobato, L.; Martínková, M.; Shimizu, T.; Liebl, U.; Vos, M.; Ultrafast Spectroscopy Evidence for Picosecond Ligand Exchange at the Binding Site of a Herne Protein: Heme-Based Sensor YddV. Journal of Physical Chemistry Letters, 2016, Roč. 7, č. 1, s.69-74. DOI: 10.1021/acs.jpclett.5b02517
Stiborová, M.; Indra, R.; Moserová, M.; Šulc, M.; Hodek, P.; Frei, E.; Schmeiser, H.; Arlt, V.; NADPH- and NADH-dependent metabolism of and DNA adduct formation by benzo[a]pyrene catalyzed with rat hepatic microsomes and cytochrome P450 1A1. Monatshefte für Chemie, 2016, Roč. 147, č. 5, s.847-855. DOI: 10.1007/s00706-016-1713-y
Černá, T.; Eckschlager, T.; Stiborová, M.; Targeted nanoparticles - a promising opportunity in cancer therapy - Review. Journal of Metallomics and Nanotechnologies [online], 2016, Roč. 2, č. 4, s.6-11.
Nguyen, HV.; Richtera, L.; Moulick, A.; Xhaxhiu, K.; Kudr, Cernei, N.; Polanská, H.; Heger, Masařík, M.; Kopel, P.; Stiborová, M.; Eckschlager, T.; Adam, V.; Kizek, R.; Electrochemical sensing of etoposide using carbon quantum dot modified glassy carbon electrode. The Analyst, 2016, Roč. 141, č. 9, s.2665-2675. DOI: 10.1039/c5an02476e
Skaličková, S.; Nejdl, L.; Kudr, J.; Ruttkay-Nedecký, B.; Jimenez Jimenez, AM.; Kopel, P.; Kremplová, M.; Masařík, M.; Stiborová, M.; Eckschlager, T.; Adam, V.; Kizek, R.; Fluorescence Characterization of Gold Modified Liposomes with Antisense N-myc DNA Bound to the Magnetisable Particles with Encapsulated Anticancer Drugs (Doxorubicin, Ellipticine and Etoposide). Sensors, 2016, Roč. 16, č. 3, s.nestránkováno. DOI: 10.3390/s16030290
Heřmanová, I.; Arruabarrena-Aristorena, A.; Vališ, K.; Nuskova, H.; Alberich-Jorda, M.; Fišer, K.; Fernandez-Ruiz, S.; Kavan, D.; Pecinova, A.; Niso-Santano, M.; Žaliová, M.; Novák, P.; Houstek, J.; Mracek, T.; Kroemer, G.; Carracedo, A.; Trka, J.; Starková, J.; Pharmacological inhibition of fatty-acid oxidation synergistically enhances the effect of L-asparaginase in childhood ALL cells. Leukemia, 2016, Roč. 30, č. 1, s.209-218. DOI: 10.1038/leu.2015.213
Machara, A.; Lux, V.; Kožíšek, M.; Grantz Šašková, K.; Štěpánek, O.; Kotora, M.; Parkan, K.; Pávová, M.; Glass, B.; Sehr, P.; Lewis, J.; Müller, B.; Kräusslich, H.; Konvalinka, J.; Specific Inhibitors of HIV Capsid Assembly Binding to the C-Terminal Domain of the Capsid Protein: Evaluation of 2-Arylquinazolines as Potential Antiviral Compounds. Journal of Medicinal Chemistry, 2016, Roč. 59, č. 2, s.545-558. DOI: 10.1021/acs.jmedchem.5b01089
Stráňava, M.; Martínek, V.; Man, P.; Fojtíková, V.; Kavan, D.; Vaněk, O.; Shimizu, T.; Martínková, M.; Structural Characterization of the Heme-based Oxygen Sensor, AfGcHK, its Interactions with the Cognate Response Regulator, and their Combined Mechanism of Action in a Bacterial Two-component Signaling System. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2016, Roč. 84, č. 10, s.1375-1389. DOI: 10.1002/prot.25083
Šácha, P.; Knedlík, T.; Schimer, J.; Tykvart, J.; Parolek, J.; Navrátil, V.; Dvořáková, P.; Sedlák, F.; Ulbrich, K.; Strohalm, J.; Majer, P.; Šubr, V.; Konvalinka, J.; iBodies: Modular Synthetic Antibody Mimetics Based on Hydrophilic Polymers Decorated with Functional Moieties. Angewandte Chemie - International Edition, 2016, Roč. 55, č. 7, s.2356-2360. DOI: 10.1002/anie.201508642
Berenguer Albiñana, C.; Machara, A.; Řezáčová, P.; Pachl, P.; Konvalinka, J.; Kožíšek, M.; Kinetic, thermodynamic and structural analysis of tamiphosphor binding to neuraminidase of H1N1 (2009) pandemic influenza. European Journal of Medicinal Chemistry, 2016, Roč. 121, č. October 2016, s.100-109. DOI: 10.1016/j.ejmech.2016.05.016
Navrátil, M.; Tykvart, J.; Schimer, J.; Pachl, P.; Navrátil, V.; Rokob, TA.; Hlouchová, K.; Rulíšek, L.; Konvalinka, J.; Comparison of human glutamate carboxypeptidases II and III reveals their divergent substrate specificities. FEBS Journal, 2016, Roč. 283, č. 13, s.2528-2545. DOI: 10.1111/febs.13761
Machara, A.; Konvalinka, J.; Kotora, M.; A Modular Synthesis of N-Benzotriazole Ureas Using Alkylation of 5-Nitrobenzotriazole. ChemistrySelect [online], 2016, Roč. 1, č. 1, s.101-107. DOI: 10.1002/slct.201600025
Fejfarová, K.; Kádek, A.; Mrázek, H.; Hausner, J.; Treťjačenko, V.; Koval, T.; Man, P.; Hašek, J.; Dohnálek, J.; Crystallization of nepenthesin I using a low-pH crystallization screen. Acta Crystallographica Section F: Structural Biology Communications [online], 2016, Roč. 72, č. 1, s.24-28. DOI: 10.1107/S2053230X15022323
Klima, M.; Tóth, DJ.; Hexnerová, R.; Baumlová, A.; Chalupská, D.; Tykvart, J.; Řežábková, L.; Sengupta, N.; Man, P.; Dubánková, A.; Humpolíčková, J.; Nencka, R.; Veverka, V.; Balla, T.; Bouřa, E.; Structural insights and in vitro reconstitution of membrane targeting and activation of human PI4KB by the ACBD3 protein. Scientific Reports, 2016, Roč. 6, č. March 2016, s.nestránkováno. DOI: 10.1038/srep23641
Dostalova, S.; Černá, T.; Hynek, D.; Koudelkova, Z.; Vaculovic, T.; Kopel, P.; Hraběta, J.; Heger, Z.; Vaculovicova, M.; Eckschlager, T.; Stiborová, M.; Adam, V.; Site-Directed Conjugation of Antibodies to Apoferritin Nanocarrier for Targeted Drug Delivery to Prostate Cancer Cells. ACS applied materials & interfaces, 2016, Roč. 8, č. 23, s.14430-14441. DOI: 10.1021/acsami.6b04286
Srp, J.; Nussbaumerová, M.; Horn, M.; Mareš, M.; Digestive proteolysis in the Colorado potato beetle, Leptinotarsa decemlineata: Activity-based profiling and imaging of a multipeptidase network. Insect Biochemistry and Molecular Biology, 2016, Roč. 78, č. November 2016, s.1-11. DOI: 10.1016/j.ibmb.2016.08.004.
Nováková, M.; Šašek, V.; Trdá, L.; Krutinová, H.; Mongin, T.; Valentová, O.; Balesdent, M.; Rouxel, T.; Burketová, L.; Leptosphaeria maculans effector AvrLm4-7 affects salicylic acid (SA) and ethylene (ET) signalling and hydrogen peroxide (H2O2) accumulation in Brassica napus. Molecular Plant Pathology, 2016, Roč. 17, č. 6, s.818-831. DOI: 10.1111/mpp.12332
Vít, O.; Man, P.; Kádek, A.; Hausner, J.; Sklenar, J.; Harant, K.; Novák, P.; Ščigelová, M.; Woffendin, G.; Petrák, J.; Large-scale identification of membrane proteins based on analysis of trypsin-protected transmembrane segments. Journal of Proteomics, 2016, Roč. 149, č. Special Issue, October 2016, s.15-22. DOI: 10.1016/j.jprot.2016.03.016
Pompach, P.; Benada, O.; Rosůlek, M.; Darebná, P.; Hausner, J.; Růžička, V.; Volný, Novák, P.; Protein Chips Compatible with MALDI Mass Spectrometry Prepared by Ambient Ion Landing. Analytical Chemistry, 2016, Roč. 88, č. 17, s.8526-8534. DOI: 10.1021/acs.analchem.6b01366
Sivá, M.; Svoboda, M.; Veverka, V.; Trempe, J.; Hofmann, K.; Kožíšek, M.; Hexnerová, R.; Sedlák, F.; Belza, J.; Brynda, J.; Šácha, P.; Hubálek, M.; Starková, J.; Flaisigová, I.; Konvalinka, J.; Grantz Šašková, K.; Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog. Scientific Reports, 2016, Roč. 6, č. 7, s.nestránkováno. DOI: 10.1038/srep30443
Křížková, K.; Chrudinová, M.; Povalová, A.; Selicharová, I.; Collinsová, M.; Vaněk, V.; Brzozowski, A.; Jiráček, J.; Žáková, L.; Insulin-Insulin-like Growth Factors Hybrids as Molecular Probes of Hormone:Receptor Binding Specificity. Biochemistry, 2016, Roč. 55, č. 21, s.2903-2913. DOI: 10.1021/acs.biochem.6b00140
Makukhin, N.; Treťjačenko, V.; Moskovitz, J.; Míšek, J.; A Ratiometric Fluorescent Probe for Imaging of the Activity of Methionine Sulfoxide Reductase A in Cells. Angewandte Chemie - International Edition, 2016, Roč. 55, č. 41, s.12727-12730. DOI: 10.1002/anie.201605833
Trempe, J.; Grantz Šašková, K.; Sivá, M.; Ratcliffe, C.; Veverka, V.; Hoegl, A.; Menade, M.; Feng, X.; Shenker, S.; Svoboda, M.; Kožíšek, M.; Konvalinka, J.; Gehring, K.; Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family. Scientific Reports, 2016, Roč. 6, č. 20 September, s.nestránkováno. DOI: 10.1038/srep33671
Heger, Z.; Polanska, H.; Rodrigo, M.; Guran, R.; Kulich, P.; Kopel, P.; Masarik, M.; Eckschlager, T.; Stiborová, M.; Kizek, R.; Adam, V.; Prostate tumor attenuation in the nu/nu murine model due to anti-sarcosine antibodies in folate-targeted liposomes. Scientific Reports, 2016, Roč. 6, č. September, s.nestránkováno. DOI: 10.1038/srep33379
Grobárová, V.; Vališ, K.; Talacko, P.; Pavlů, B.; Hernychová, L.; Nováková, J.; Stodůlková, E.; Flieger, M.; Novák, P.; Černý, J.; Quambalarine B, a Secondary Metabolite from Quambalaria cyanescens with Potential Anticancer Properties. Journal of Natural Products, 2016, Roč. 79, č. 9, s.2304-2314. DOI: 10.1021/acs.jnatprod.6b00362
Srp, J.; Mareš, M.; KUNITZOVY PROTEASOVÉ INHIBITORY Z ROSTLIN: STRUKTURNÍ A FUNKČNÍ DIVERZITA. Chemické listy, 2016, Roč. 110, č. 11, s.761-768.
Hálková, T.; Dvorakova, S.; Sykorova, V.; Vaclavikova, E.; Vcelak, J.; Vlček, P.; Sýkorová, P.; Kodetová, D.; Betka, J.; Laštůvka, P.; Bavor, P.; Hoch, J.; Katra, R.; Bendlova, B.; Polymorphisms in selected DNA repair genes and cell cycle regulating genes involved in the risk of papillary thyroid carcinoma. Cancer Biomarkers, 2016, Roč. 17, č. 1, s.97-106. DOI: 10.3233/CBM-160622
Kožíšek, M.; Štěpánek, O.; Parkan, K.; Berenguer Albiñana, C.; Pávova, M.; Weber, J.; Kräusslich, H.; Konvalinka, J.; Machara, A.; Synthesis and evaluation of 2-pyridinylpyrimidines as inhibitors of HIV-1 structural protein assembly. Bioorganic and Medicinal Chemistry Letters, 2016, Roč. 26, č. 15, s.3487-3490. DOI: 10.1016/j.bmcl.2016.06.039
Stiborová, M.; Indra, R.; Moserová, M.; Frei, E.; Schmeiser, H.; Kopka, K.; Philips, D.; Arlt, V.; NADH:Cytochrome b(5) Reductase and Cytochrome b(5) Can Act as Sole Electron Donors to Human Cytochrome P450 1A1-Mediated Oxidation and DNA Adduct Formation by Benzo[a]pyrene. Chemical Research in Toxicology, 2016, Roč. 29, č. 8, s.1325-1334. DOI: 10.1021/acs.chemrestox.6b00143
Rozbeský, D.; Adámek, D.; Pospíšilová, E.; Novák, P.; Chmelík, J.; Solution structure of the lymphocyte receptor Nkrp1a reveals a distinct conformation of the long loop region as compared to in the crystal structure. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2016, Roč. 84, č. 9, s.1304-1311. DOI: 10.1002/prot.25078
Bařinka, C.; Ptáček, J.; Richter, A.; Nováková, Z.; Morath, V.; Skerra, A.; Selection and characterization of Anticalins targeting human prostate-specific membrane antigen (PSMA). Protein Engineering, Design and Selection, 2016, Roč. 29, č. 3, s.105-115. DOI: 10.1093/protein/gzv065
Fojtíková, V.; Bartošová, M.; Man, P.; Stráňava, M.; Shimizu, T.; Martínková, M.; Effects of hydrogen sulfide on the heme coordination structure and catalytic activity of the globin-coupled oxygen sensor AfGcHK. Biometals, 2016, Roč. 29, č. 4, s.715-729. DOI: 10.1007/s10534-016-9947-z
Abdel Rahman, MAK.; Hraběta, J.; Groh, T.; Procházka, P.; Doktorová, H.; Eckschlager, T.; Valproic Acid Increases CD133 Positive Cells that Show Low Sensitivity to Cytostatics in Neuroblastoma. PLoS ONE, 2016, Roč. 11, č. 9, s.nestránkováno. DOI: 10.1371/journal.pone.0162916
Růžička, M.; Koval, D.; Vávra, J.; Reyes-Gutiérrez, P.; Teplý, F.; Kašička, V.; Interactions of of helquats with chiral acidic aromatic analytes investigated by partial-filling affinity capillary electrophoresis. Journal of Chromatography A, 2016, Roč. 1467, č. 7 October 2016, s.417-426. DOI: 10.1016/j.chroma.2016.08.0532-s2.0-84991054850
Pospíšilová, E.; Kavan, D.; Novák, P.; Chmelík, J.; H-1, C-13 and N-15 resonance assignments of human DCL-1 (CD302) extracellular domain. Biomolecular NMR Assignments, 2016, Roč. 10, č. 1, s.189-192. DOI: 10.1007/s12104-015-9664-5
Hexnerová, R.; Křížková, K.; Fábry, M.; Sieglová, I.; Kedrová, K.; Collinsová, M.; Ullrichová, P.; Srb, P.; Williams, C.; Crump, M.; Tošner, Z.; Jiráček, J.; Veverka, V.; Žáková, L.; Probing Receptor Specificity by Sampling the Conformational Space of the Insulin-like Growth Factor II C-domain. Journal of Biological Chemistry, 2016, Roč. 291, č. 40, s.21234-21245. DOI: 10.1074/jbc.M116.741041
Heger, Z.; Rodrigo, M.; Michalek, P.; Polanska, H.; Masarik, M.; Vit, V.; Plevova, M.; Pacik, D.; Eckschlager, T.; Stiborová, M.; Adam, V.; Sarcosine Up-Regulates Expression of Genes Involved in Cell Cycle Progression of Metastatic Models of Prostate Cancer. PLoS ONE, 2016, Roč. 11, č. 11, s.nestránkováno. DOI: 10.1371/journal.pone.0165830
Šimoník, O.; Rajmon, R.; Stádník, L.; Šichtař, J.; Beran, J.; Ducháček, J.; Hodek, P.; Trefil, P.; Effect of low-density lipoprotein addition to soybean lecithin-based extenders on bull spermatozoa following freezing-thawing - preliminary results. Czech Journal of Animal Science, 2016, Roč. 61, č. 12, s.560-567. DOI: 10.17221/27/2016-CJAS
Vališ, K.; Talacko, P.; Grobárová, V.; Černý, J.; Novák, P.; Shikonin regulates C-MYC and GLUT1 expression through the MST1-YAP1-TEAD1 axis. Experimental Cell Research, 2016, Roč. 349, č. 2, s.273-281. DOI: 10.1016/j.yexcr.2016.10.018
Ingr, M.; Kutálková, E.; Hrnčiřík, J.; Lange, R.; Equilibria of oligomeric proteins under high pressure - A theoretical description. Journal of Theoretical Biology, 2016, Roč. 411, č. 21 prosince 2016, s.16-26. DOI: 10.1016/j.jtbi.2016.10.001
Jeřábek, P.; Florián, J.; Martínek, V.; Lipid molecules can induce an opening of membrane-facing tunnels in cytochrome P450 1A2. Physical Chemistry Chemical Physics, 2016, Roč. 18, č. 44, s.30344-30356. DOI: 10.1039/c6cp03692a
Zahradník, J.; Kyslíková, E.; Kyslík, P.; Draft Genome Sequence of Agrobacterium sp. Strain R89-1, a Morphine Alkaloid-Biotransforming Bacterium. Genome Announcements [online], 2016, Roč. 4, č. 2, s.nestránkováno. DOI: 10.1128/genomeA.00196-16
Ďurech, M.; Trčka, F.; Man, P.; Blackburn, E.; Hernychová, L.; Dvořáková, P.; Coufalová, D.; Kavan, D.; Vojtěšek, B.; Muller, P.; Novel Entropically Driven Conformation-specific Interactions with Tomm34 Protein Modulate Hsp70 Protein Folding and ATPase Activities. Molecular and Cellular Proteomics, 2016, Roč. 15, č. 5, s.1710-1727. DOI: 10.1074/mcp.M116.058131
Pompach, P.; Nováková, J.; Kavan, D.; Benada, O.; Růžička, V.; Volný, M.; Novák, P.; Planar Functionalized Surfaces for Direct Immunoaffinity Desorption/Ionization Mass Spectrometry. Clinical Chemistry, 2016, Roč. 62, č. 1, s.270-278. DOI: 10.1373/clinchem.2015.244004
Hanne, J.; Goettfer, F.; Schimer, J.; Anders-Oesswein, M.; Konvalinka, J.; Engelhardt, J.; Mueller, B.; Hell, S.; Kraeusslich, H.; Stimulated Emission Depletion Nanoscopy Reveals Time-Course of Human Immunodeficiency Virus Proteolytic Maturation. ACS Nano, 2016, Roč. 10, č. 9, s.8215-8222. DOI: 10.1021/acsnano.6b03850
Kuipers, K.; Gallay, C.; Martínek, V.; Rohde, M.; Martínková, M.; van der Beek, S.; Jong, W.; Venselaar, H.; Zomer, A.; Bootsma, H.; Veening, J.; de Jonge, M.; Highly conserved nucleotide phosphatase essential for membrane lipid homeostasis in Streptococcus pneumoniae. Molecular Microbiology, 2016, Roč. 101, č. 1, s.12-26. DOI: 10.1111/mmi.13312
Rey, M.; Yang, M.; Lee, L.; Zhang, Y.; Sheff, J.; Sensen, C.; Mrázek, H.; Halada, P.; Man, P.; McCarville, J.; Verdu, E.; Schriemer, D.; Addressing proteolytic efficiency in enzymatic degradation therapy for celiac disease. Scientific Reports, 2016, Roč. 6, č. 2 srpna 2016, s.nestránkováno. DOI: 10.1038/srep30980
Kylarová, S.; Košek, D.; Petrvalská, O.; Pšenáková, K.; Man, P.; Večeř, J.; Heřman, P.; Obšilová, V.; Obšil, T.; Cysteine residues mediate high-affinity binding of thioredoxin to ASK1. FEBS Journal, 2016, Roč. 283, č. 20, s.3821-3838. DOI: 10.1111/febs.13893
Wald, T.; Osičková, A.; Mašín, J.; Matyska Lišková, P.; Petry-Podgorska, I.; Matoušek, T.; Šebo, P.; Osička, R.; Transmembrane segments of complement receptor 3 do not participate in cytotoxic activities but determine receptor structure required for action of Bordetella adenylate cyclase toxin. Pathogens and Disease, 2016, Roč. 74, č. 3, s.nestránkováno. DOI: 10.1093/femspd/ftw008
Petrvalská, O.; Košek, D.; Kukacka, Z.; Tošner, Z.; Man, P.; Večeř, J.; Heřman, P.; Obsilova, V.; Obšil, T.; Structural Insight into the 14-3-3 Protein-dependent Inhibition of Protein Kinase ASK1 (Apoptosis Signal-regulating kinase 1). Journal of Biological Chemistry, 2016, Roč. 291, č. 39, s.20753-20765. DOI: 10.1074/jbc.M116.724310
Synková, H.; Hýsková, V.; Garčeková, K.; Křížová, S.; Ryšlavá, H.; Protein as a sole source of nitrogen for in vitro grown tobacco plantlets. Biologia Plantarum, 2016, Roč. 60, č. 4, s.635-644. DOI: 10.1007/s10535-016-0639-x
Kubrycht, J.; Sigler, K.; Souček, Hudeček, J.; Antibody -Like Phosphorylation Sites in Focus of Statistically Based Bilingual Approach. Computational Molecular Bioscience, 2016, Roč. 6, č. 1, s.1-22. DOI: 10.4236/cmb.2016.61001
Mašín, J.; Osičková, A.; Sukova, A.; Fišer, R.; Halada, P.; Bumba, L.; Linhartova, I.; Osička, R.; Šebo, P.; Negatively charged residues of the segment linking the enzyme and cytolysin moieties restrict the membrane-permeabilizing capacity of adenylate cyclase toxin. Scientific Reports, 2016, Roč. 6, č. SEP 1 2016, s.1-14. DOI: 10.1038/srep29137
Hraběta, J.; Eckschlager, T.; Stiborová, M.; Heger, Z.; Krizkova, S.; Adam, V.; Zinc and zinc-containing biomolecules in childhood brain tumors. Journal of Molecular Medicine, 2016, Roč. 94, č. 11, s.1199-1215. DOI: 10.1007/s00109-016-1454-8
Rodrigo, M.; Krejcova, L.; Kudr, J.; Cernei, N.; Kopel, P.; Richtera, L.; Moulick, A.; Hynek, D.; Adam, V.; Stiborová, M.; Eckschlager, T.; Heger, Z.; Zitka, O.; Fully automated two-step assay for detection of metallothionein through magnetic isolation using functionalized gamma-Fe2O3 particles. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 2016, Roč. 1039, č. December, s.17-27. DOI: 10.1016/j.jchromb.2016.10.018
Heger, Eckschlager, T.; Stiborová, M.; Adam, Glycin-N-metyltransferáza a nádorová onemocnění prostaty. Klinická onkologie, 2016, Roč. 29, č. 5, s.331-335. DOI: 10.14735/amko2016331
Stiborová, M.; Arlt, V.; Schmeiser, H.; Balkan endemic nephropathy: an update on its aetiology. Archives of Toxicology, 2016, Roč. 90, č. 11, s.2595-2615. DOI: 10.1007/s00204-016-1819-3
Jirků, M.; Lánský, Z.; Bednárová, L.; Šulc, M.; Monincová, L.; Majer, P.; Vyklický, L.; Vondrášek, J.; Teisinger, J.; Boušová, K.; The characterization of a novel S100A1 binding site in the N-terminus of TRPM1. International Journal of Biochemistry and Cell Biology, 2016, Roč. 78, č. September 2016, s.186-193. DOI: 10.1016/j.biocel.2016.07.014
Maňásková-Postlerová, P.; Cozlová, N.; Dorosh, A.; Šulc, M.; Guyonnet, B.; Jonáková, V.; Acrosin inhibitor detection along the boar epididymis. International Journal of Biological Macromolecules, 2016, Roč. 82, č. January 2016, s.733-739. DOI: 10.1016/j.ijbiomac.2015.10.034
Veselá, AB.; Rucká, L.; Kaplan, O.; Pelantová, H.; Nešvera, J.; Pátek, M.; Martínková, L.; Bringing nitrilase sequences from databases to life: the search for novel substrate specificities with a focus on dinitriles. Applied Microbiology and Biotechnology, 2016, Roč. 100, č. 5, s.2193-2202. DOI: 10.1007/s00253-015-7023-1
Frimmelová, M.; Toman, R.; Pompach, P.; Škultéty, L.; Modifications in the glycerophospholipid composition between the Coxiella burnetii phase I and phase II cells suggest an association with phase variation of the bacterium. Acta Virologica, 2016, Roč. 60, č. 1, s.27-33. DOI: 10.4149/av_2016_01_27
Lidman, M.; Pokorná, Š.; Dingeldein, APG.; Sparrman, T.; Wallgren, M.; Šachl, R.; Hof, M.; Grobner, G.; The oxidized phospholipid PazePC promotes permeabilization of mitochondrial membranes by Bax. Biochimica et Biophysica Acta - Biomembranes, 2016, Roč. 1858, č. 6, s.1288-1297. DOI: 10.1016/j.bbamem.2016.03.003
Bořek Dohalská, L.; Klusoňová, Z.; Holecová, J.; Martínková, M.; Bárta, F.; Dračínská, H.; Cajthaml, T.; Stiborová, M.; Exposure of rats to exogenous endocrine disruptors 17alpha-ethinylestradiol and benzo(a)pyrene and an estrogenic hormone estradiol induces expression of cytochromes P450 involved in their metabolism. Neuroendocrinology Letters, 2016, Roč. 37, č. Suppl. 1, s.84-94.
Šulc, M.; Mrízová, I.; Černá, T.; Frei, E.; Eckschlager, T.; Adam, V.; Kopečková, K.; Stiborová, M.; Effectiveness of human cytochrome P450 3A4 present in liposomal and microsomal nanoparticles in formation of covalent DNA adducts by ellipticine. Neuroendocrinology Letters, 2016, Roč. 37, č. Suppl. 1, s.95-102.

2015

Kulhavá, L.; Miarková, E.; Přikryl, P.; Hodek, P.; Tichá, M.; Kučerová, Z.; Chicken and rabbit antibodies against porcine pepsinogen A. Prague medical report, 2015, Roč. 116, č. 1, s.16-23. DOI: 10.14712/23362936.2015.41
Vyhlídalová, I.; Uherková, L.; Pleschnerová, M.; Špička, I.; Březinová, J.; Michalová, K.; Čermáková, K.; Polanská, V.; Jedelský, P.; Hamšíková, E.; Kuželová, K.; Stöckbauer, P.; Characterization of a new human plasma cell leukemia cell line UHKT-944. European Journal of Haematology, 2015, Roč. 95, č. 4, s.352-360. DOI: 10.1111/ejh.12505
Rozbeský, D.; Ivanova, L.; Hernychová, L.; Grobárová, V.; Novák, P.; Černý, J.; Nkrp1 Family, from Lectins to Protein Interacting Molecules. Molecules, 2015, Roč. 20, č. 2, s.3463-3478. DOI: 10.3390
Nosková, L.; Kubíčková, B.; Vašková, L.; Bláhová, B.; Wimmerova, M.; Stiborová, M.; Hodek, P.; Fluorescent Cellular Assay for Screening Agents Inhibiting Pseudomonas aeruginosa Adherence. Sensors, 2015, Roč. 15, č. 1, s.1945-1953. DOI: 10.3390/s150101945
Vaculík, P.; Plchová, H.; Moravec, T.; Hoffmeisterová, H.; Čeřovská, N.; Šmahel, M.; Potato virus X displaying the E7 peptide derived from human papillomavirus type 16: a novel position for epitope presentation. Plant Cell, Tissue and Organ Culture, 2015, Roč. 120, č. 2, s.671-680. DOI: 10.1007/s11240-014-0634-x
Kacířová, M.; Košek, D.; Kádek, A.; Man, P.; Večeř, J.; Heřman, P.; Obšilová, V.; Obšil, T.; Structural Characterization of Phosducin and its Complex with the 14-3-3 Protein. Journal of Biological Chemistry, 2015, Roč. 290, č. 26, s.16246-16260. DOI: 10.1074/jbc.M115.636563
Kukačka, Z.; Rosůlek, M.; Strohalm, M.; Kavan, D.; Novák, P.; Mapping protein structural changes by quantitative cross-linking. Methods, 2015, Roč. 89, č. 1 November 2015, s.112-120. DOI: 10.1016/j.ymeth.2015.05.027
Blazkova, I.; Smerkova, K.; Blazkova, L.; Vaculovicova, M.; Stiborová, M.; Eckschlager, T.; Beklova, M.; Adam, V.; Kizek, R.; Doxorubicin interactions with bovine serum albumin revealed by microdialysis with on-line laser-induced fluorescence detection at subpicogram level. Electrophoresis, 2015, Roč. 36, č. 11-12, s.1282-1288. DOI: 10.1002/elps.201400564
Groh, T.; Hraběta, J.; Khalil, M.; Doktorová, H.; Eckschlager, T.; Stiborová, M.; The synergistic effects of DNA-damaging drugs cisplatin and etoposide with a histone deacetylase inhibitor valproate in high-risk neuroblastoma cells. International Journal of Oncology, 2015, Roč. 47, č. 1, s.343-352. DOI: 10.3892/ijo.2015.2996
Skálová, T.; Bláha, J.; Harlos, K.; Dušková, J.; Koval', T.; Stránský, J.; Hašek, J.; Vaněk, O.; Dohnálek, J.; Four crystal structures of human LLT1, a ligand of human NKR-P1, in varied glycosylation and oligomerization states. Acta Crystallographica Section D: Biological Crystallography [online], 2015, Roč. 71, č. March 2015, s.578-591. DOI: 10.1107/S1399004714027928
Pavlou, A.; Martínková, M.; Shimizu, T.; Kitanishi, K.; Stráňava, M.; Loullis, A.; Pinakoulaki, E.; Probing the ligand recognition and discrimination environment of the globin-coupled oxygen sensor protein YddV by FTIR and time-resolved step-scan FTIR spectroscopy. Physical Chemistry Chemical Physics, 2015, Roč. 17, č. 26, s.17007-17015. DOI: 10.1039/c5cp01708d
Dvořáková, Š.; Sýkorová, V.; Václavíková, E.; Sýkorová, P.; Vlček, P.; Kodetová, D.; Laštůvka, P.; Betka, J.; Mokrejš, M.; Včelák, J.; Bendlová, B.; A 3-bp Deletion VK600-1E in the BRAF Gene Detected in a Young Woman with Papillary Thyroid Carcinoma. Endocrine Pathology, 2015, Roč. 26, č. 4, s.309-314. DOI: 10.1007/s12022-015-9387-2
Vaculík, P.; Plchová, H.; Moravec, T.; Čeřovská, N.; New positions for peptide presentation in Potato virus X capsid protein. Open Life Sciences [online], 2015, Roč. 10, č. 1, s.133-141. DOI: 10.1515/biol-2015-0019
Plchová, H.; Vaculík, P.; Čeřovská, N.; Moravec, T.; Dědič, P.; Molecular and Biological Analysis of Potato virus M (PVM) Isolates from the Czech Republic. Journal of Phytopathology, 2015, Roč. 163, č. 11-12, s.1031-1035. DOI: 10.1111/jph.12334
Veselá, A.; Křenková, A.; Martínková, L.; Exploring the Potential of Fungal Arylacetonitrilases in Mandelic Acid Synthesis. Applied Biochemistry and Biotechnology - Part B Molecular Biotechnology, 2015, Roč. 57, č. 5, s.466-474. DOI: 10.1007/s12033-015-9840-y
Hernychová, L.; Mrázek, H.; Ivanova, L.; Kukačka, Z.; Chmelík, J.; Novák, P.; Recombinant Expression, In Vitro Refolding and Characterizing Disulfide Bonds of a Mouse Inhibitory C-Type Lectin-Like Receptor Nkrp1b. Physiological Research, 2015, Roč. 64, č. 1, s.85-93.
Martínková, L.; Veselá, A.; Rinágelová, A.; Chmátal, M.; Cyanide hydratases and cyanide dihydratases: emerging tools in the biodegradation and biodetection of cyanide. Applied Microbiology and Biotechnology, 2015, Roč. 99, č. 21, s.8875-8882. DOI: 10.1007/s00253-015-6899-0
Wilding, B.; Veselá, A.; Perry, JJB.; Black, GW.; Zhang, M.; Martínková, L.; Klempier, N.; An investigation of nitrile transforming enzymes in the chemo-enzymatic synthesis of the taxol sidechain. Organic and Biomolecular Chemistry, 2015, Roč. 13, č. 28, s.7803-7812. DOI: 10.1039/c5ob01191d
Grulich, M.; Brezovský, J.; Štìpánek, V.; Palyzová, A.; Kyslíková, E.; Kyslík, P.; Resolution of alpha/beta-amino acids by enantioselective penicillin G acylase from Achromobacter sp.. Journal of Molecular Catalysis - B Enzymatic, 2015, Roč. 122, č. December, s.240-247. DOI: 10.1016/j.molcatb.2015.09.008
Arlt, V.; Krais, A.; Godschalk, R.; Riffo-Vasquez, Y.; Mrízová, I.; Roufosse, C.; Corbin, C.; Shi, Q.; Frei, E.; Stiborová, M.; van Schooten, F.; Phillips, D.; Spina, D.; Pulmonary Inflammation Impacts on CYP1A1-Mediated Respiratory Tract DNA Damage Induced by the Carcinogenic Air Pollutant Benzo[a]pyrene. Toxicological Sciences, 2015, Roč. 146, č. 2, s.213-225. DOI: 10.1093/toxsci/kfv086
Arlt, V.; Henderson, C.; Wolf, C.; Stiborová, M.; Phillips, D.; The Hepatic Reductase Null (HRN (TM)) and Reductase Conditional Null (RCN) mouse models as suitable tools to study metabolism, toxicity and carcinogenicity of environmental pollutants. Toxicology Research, 2015, Roč. 4, č. 3, s.548-562. DOI: 10.1039/c4tx00116h
Beyerle, J.; Frei, E.; Stiborová, M.; Habermann, N.; Ulrich, CM.; Biotransformation of xenobiotics in the human colon and rectum and its association with colorectal cancer. Drug Metabolism Reviews, 2015, Roč. 47, č. 2, s.199-221. DOI: 10.3109/03602532.2014.996649
Heger, Z.; Moulick, A.; Nguyen, HV.; Kremplová, M.; Kopel, P.; Hynek, D.; Eckschlager, T.; Stiborová, M.; Zítka, O.; Adam, V.; Kizek, R.; Characterization of Multi-Walled Carbon Nanotubes Double- Functionalization with Cytostatic Drug Etoposide and Phosphorothioate Oligodeoxynucleotides. International Journal of Electrochemical Science, 2015, Roč. 10, č. 9, s.7707-7719.
Hraběta, J.; Groh, T.; Khalil, MA.; Poljaková, J.; Adam, V.; Kizek, R.; Uhlík, J.; Doktorová, H.; Černá, T.; Frei, E.; Stiborová, M.; Eckschlager, T.; Vacuolar-ATPase-mediated intracellular sequestration of ellipticine contributes to drug resistance in neuroblastoma cells. International Journal of Oncology, 2015, Roč. 47, č. 3, s.971-980. DOI: 10.3892/ijo.2015.3066
Ječmen, T.; Ptáčková, R.; Černá, V.; Dračínská, H.; Hodek, P.; Stiborová, M.; Hudeček, J.; Šulc, M.; Photo-initiated crosslinking extends mapping of the protein-protein interface to membrane-embedded portions of cytochromes P450 2B4 and b5. Methods, 2015, Roč. 89, č. November 2015, s.128-137. DOI: 10.1016/j.ymeth.2015.07.015
Karlová, P.; Halecký, M.; Páca, J.; Stiborová, M.; Kozliak, EI.; Aerobic biodegradation of dinitrophenols and their mixture in continuous operations by an immobilized mixed microbial community. Clean Technologies and Environmental Policy, 2015, Roč. 17, č. 1, s.287-291. DOI: 10.1007/s10098-014-0772-1
Heger, Z.; Eckschlager, T.; Stiborová, M.; Adam, V.; Zítka, O.; Kizek, R.; Moderní nanomedicína v léčbě karcinomů plic. Klinická onkologie, 2015, Roč. 28, č. 4, s.245-250. DOI: 10.14735/amko2015245
Spoustová, P.; Hýsková, V.; Mueller, K.; Schnablová, R.; Ryšlavá, H.; Čeřovská, N.; Malbeck, J.; Cvikrova, M.; Synková, H.; Tobacco susceptibility to Potato virus Y-NTN infection is affected by grafting and endogenous cytokinin content. Plant Science, 2015, Roč. 235, č. neuveden, s.25-36. DOI: 10.1016/j.plantsci.2015.02.017
Stiborová, M.; Černá, V.; Moserová, M.; Mrízová, I.; Arlt, V.; Frei, E.; The Anticancer Drug Ellipticine Activated with Cytochrome P450 Mediates DNA Damage Determining Its Pharmacological Efficiencies: Studies with Rats, Hepatic Cytochrome P450 Reductase Null (HRN (TM)) Mice and Pure Enzymes. International Journal of Molecular Sciences, 2015, Roč. 16, č. 1, s.284-306. DOI: 10.3390/ijms16010284
Hadrabová, J.; Majerová, B.; Černá, V.; Moserová, M.; Holuša, R.; Mandys, V.; Stiborová, M.; Stríž, I.; Hodek, P.; Chicken immunoglobulins for prophylaxis: Effect of inhaled antibodies on inflammatory parameters in rat airways. Journal of Applied Biomedicine, 2015, Roč. 13, č. 1, s.19-22. DOI: 10.1016/j.jab.2014.04.003
Tykvart, J.; Bařinka, C.; Svoboda, M.; Navrátil, V.; Souček, R.; Hubálek, M.; Hradílek, M.; Šácha, P.; Lubkowski, J.; Konvalinka, J.; Structural and Biochemical Characterization of a Novel Aminopeptidase from Human Intestine. Journal of Biological Chemistry, 2015, Roč. 290, č. 18, s.11321-11336. DOI: 10.1074/jbc.M114.628149
Bárta, F.; Levová, K.; Hodek, P.; Schmeiser, HH.; Arlt, VM.; Stiborová, M.; The effects of heavy metal ions, phthalates and ochratoxin A on oxidation of carcinogenic aristolochic acid I causing Balkan endemic nephropathy. Neuroendocrinology Letters, 2015, Roč. 36, č. Suppl. 1, s.13-21.
Bořek Dohalská, L.; Valášková, P.; Kubíčková, B.; Šulc, M.; Křesinová, Z.; Cajthaml, T.; Stiborová, M.; A study on 17alpha-ethinylestradiol metabolism in rat and Pleurotus ostreatus. Neuroendocrinology Letters, 2015, Roč. 36, č. Suppl. 1, s.5-12.
Boštíková, Z.; Moserová, M.; Pávek, P.; Stiborová, M.; Hodek, P.; Role of dihydromyricetin in cytochrome P450-mediated metabolism and carcinogen activation. Neuroendocrinology Letters, 2015, Roč. 36, č. Suppl. 1, s.46-52.
Culka, M.; Milichovský, J.; Jeřábek, P.; Stiborová, M.; Martínek, V.; Ferrous and ferric state of cytochromes P450 in intact Escherichia coli cells: a possible role of cytochrome P450-flavodoxin interactions. Neuroendocrinology Letters, 2015, Roč. 36, č. Suppl. 1, s.29-37.
Hodek, P.; Hrdinová, J.; Mácová, I.; Souček, P.; Mrízová, I.; Burdová, K.; Kizek, R.; Hudeček, J.; Stiborová, M.; Preparation and application of anti-peptide antibodies for detection of orphan cytochromes P450. Neuroendocrinology Letters, 2015, Roč. 36, č. Suppl. 1, s.38-45.
Stiborová, M.; Manhartová, Z.; Hodek, P.; Adam, V.; Kizek, R.; Eckschlager, T.; Frei, E.; Cytotoxicity of and DNA adduct formation by ellipticine and its micellar form in human leukemia cells in vitro. Neuroendocrinology Letters, 2015, Roč. 36, č. Suppl. 1, s.22-28.
Stiborová, M.; Bárta, F.; Levová, K.; Hodek, P.; Schmeiser, HH.; Arlt, VM.; Martínek, V.; A Mechanism of O-Demethylation of Aristolochic Acid I by Cytochromes P450 and Their Contributions to This Reaction in Human and Rat Livers: Experimental and Theoretical Approaches. International Journal of Molecular Sciences, 2015, Roč. 16, č. 11, s.27561-27575. DOI: 10.3390/ijms161126047
Stiborová, M.; Bárta, F.; Levová, K.; Hodek, P.; Frei, E.; Arlt, VM.; Schmeiser, HH.; The influence of ochratoxin A on DNA adduct formation by the carcinogen aristolochic acid in rats. Archives of Toxicology, 2015, Roč. 89, č. 11, s.2141-2158. DOI: 10.1007/s00204-014-1360-1
Ryšlavá, H.; Pomeislová, A.; Pšondrová, Š.; Hýsková, V.; Smrček, S.; Phytoremediation of carbamazepine and its metabolite 10,11-epoxycarbamazepine by C3 and C4 plants. Environmental Science and Pollution Research, 2015, Roč. 22, č. 24, s.20271-20282. DOI: 10.1007/s11356-015-5190-3
Krásný, L.; Pompach, P.; Strnadová, M.; Hynek, R.; Vališ, K.; Havlíček, V.; Novák, P.; Volný, M.; High-throughput workflow for identification of phosphorylated peptides by LC-MALDI-TOF/TOF-MS coupled to in situ enrichment on MALDI plates functionalized by ion landing. Journal of Mass Spectrometry, 2015, Roč. 50, č. 6, s.802-811. DOI: 10.1002/jms.3586
Yan, F.; Fojtíková, V.; Man, P.; Stráňava, M.; Martínková, M.; Du, Y.; Huang, D.; Shimizu, T.; Catalytic enhancement of the heme-based oxygen-sensing phosphodiesterase EcDOS by hydrogen sulfide is caused by changes in heme coordination structure. Biometals, 2015, Roč. 28, č. 4, s.637-652. DOI: 10.1007/s10534-015-9847-7
Tomek, P.; Hrouzek, P.; Kuzma, M.; Sykora, J.; Fišer, R.; Černý, J.; Novák, P.; Bartova, S.; Simek, P.; Hof, M.; Kavan, D.; Kopecky, J.; Cytotoxic Lipopeptide Muscotoxin A, Isolated from Soil Cyanobacterium Desmonostoc muscorum, Permeabilizes Phospholipid Membranes by Reducing Their Fluidity. Chemical Research in Toxicology, 2015, Roč. 28, č. 2, s.216-224. DOI: 10.1021/tx500382b
Ingr, M.; Dostál, J.; Majerová, T.; Enzymological description of multitemplate PCR-Shrinking amplification bias by optimizing the polymerase-template ratio. Journal of Theoretical Biology, 2015, Roč. 382, č. 7 October 2015, s.178-186. DOI: 10.1016/j.jtbi.2015.06.048
Ingr, M.; Lange, R.; Halabalová, V.; Yehya, A.; Hrnčiřík, J.; Chevalier-Lucia, D.; Palmade, L.; Blayo, C.; Konvalinka, J.; Dumay, E.; Inhibitor and Substrate Binding Induced Stability of HIV-1 Protease against Sequential Dissociation and Unfolding Revealed by High Pressure Spectroscopy and Kinetics. PLoS ONE, 2015, Roč. 10, č. 3, s.nestránkováno. DOI: 10.1371/journal.pone.0119099
Fojtíková, V.; Stráňava, M.; Vos, M.; Liebl, U.; Hraníček, J.; Kitanishi, K.; Shimizu, T.; Martínková, M.; Kinetic Analysis of a Globin-Coupled Histidine Kinase, AfGcHK: Effects of the Heme Iron Complex, Response Regulator, and Metal Cations on Autophosphorylation Activity. Biochemistry, 2015, Roč. 54, č. 32, s.5017-5029. DOI: 10.1021/acs.biochem.5b00517
Konvalinka, J.; Kraeusslich, H.; Mueller, B.; Retroviral proteases and their roles in virion maturation. Virology, 2015, Roč. 479, č. May 2015, s.403-417. DOI: 10.1016/j.virol.2015.03.021
Schimer, J.; Pávová, M.; Anders, M.; Pachl, P.; Šácha, P.; Cígler, P.; Weber, J.; Majer, P.; Řezáčová, P.; Kraeusslich, H.; Mueller, B.; Konvalinka, J.; Triggering HIV polyprotein processing by light using rapid photodegradation of a tight-binding protease inhibitor. Nature Communications, 2015, Roč. 6, č. 09 March 2015, s.nestránkováno. DOI: 10.1038/ncomms7461
Tykvart, J.; Schimer, J.; Jančařík, A.; Bařinková, J.; Navrátil, V.; Starková, J.; Šrámková, K.; Konvalinka, J.; Majer, P.; Šácha, P.; Design of Highly Potent Urea-Based, Exosite-Binding Inhibitors Selective for Glutamate Carboxypeptidase II. Journal of Medicinal Chemistry, 2015, Roč. 58, č. 10, s.4357-4363. DOI: 10.1021/acs.jmedchem.5b00278
Vorlová, B.; Nachtigallová, D.; Jirásková-Vaníčková, J.; Ajani, H.; Jansa, P.; Řezáč, J.; Fanfrlík, J.; Otyepka, M.; Hobza, P.; Konvalinka, J.; Lepšík, M.; Malonate-based inhibitors of mammalian serine racemase: Kinetic characterization and structure-based computational study. European Journal of Medicinal Chemistry, 2015, Roč. 89, č. 7 January 2015, s.189-197. DOI: 10.1016/j.ejmech.2014.10.043
Jirků, M.; Bumba, L.; Bednarova, L.; Kubala, M.; Šulc, M.; Franěk, M.; Vyklicky, L.; Vondrasek, J.; Teisinger, J.; Boušová, K.; Characterization of the part of N-terminal PIP2 binding site of the TRPM1 channel. Biophysical Chemistry, 2015, Roč. 207, č. December, s.135-142. DOI: 10.1016/j.bpc.2015.10.005
Yang, M.; Hoeppner, M.; Rey, M.; Kádek, A.; Man, P.; Schriemer, D.; Recombinant Nepenthesin II for Hydrogen/Deuterium Exchange Mass Spectrometry. Analytical Chemistry, 2015, Roč. 87, č. 13, s.6681-6687. DOI: 10.1021/acs.analchem.5b00831
Hálková, T.; Dvorakova, S.; Václavíková, E.; Sykorova, V.; Včelák, J.; Sýkorová, P.; Vlček, P.; Řeboun, M.; Katra, R.; Kodetová, D.; Schrumpf, M.; van Wezel, T.; Morreau, H.; Bendlova, B.; A novel RET/PTC variant detected in a pediatric patient with papillary thyroid cancer without ionization history. Human Pathology, 2015, Roč. 46, č. 12, s.1962-1969. DOI: 10.1016/j.humpath.2015.08.013
Lennartz, F.; Bengtsson, A.; Olsen, R.; Joergensen, L.; Brown, A.; Remy, L.; Man, P.; Forest, E.; Barfod, L.; Adams, Y.; Higgins, M.; Jensen, A.; Mapping the Binding Site of a Cross-Reactive Plasmodium falciparum PfEMP1 Monoclonal Antibody Inhibitory of ICAM-1 Binding. Journal of Immunology, 2015, Roč. 195, č. 7, s.3273-3283. DOI: 10.4049/jimmunol.1501404
Kádek, A.; Kavan, D.; Felice, A.; Ludwig, R.; Halada, P.; Man, P.; Structural insight into the calcium ion modulated interdomain electron transfer in cellobiose dehydrogenase. FEBS Letters, 2015, Roč. 589, č. 11, s.1194-1199. DOI: 10.1016/j.febslet.2015.03.029
Shimizu, T.; Huang, D.; Yan, F.; Stráňava, M.; Bartošová, M.; Fojtíková, V.; Martínková, M.; Gaseous O-2, NO, and CO in Signal Transduction: Structure and Function Relationships of Heme-Based Gas Sensors and Heme-Redox Sensors. Chemical Reviews, 2015, Roč. 115, č. 13, s.6491-6533. DOI: 10.1021/acs.chemrev.5b00018
Zamrazilová, H.; Aldhoon Hainerová, I.; Atkinson, R.; Dušátková, L.; Sedláčková, B.; Lee, Z.; Kunešová, M.; Hill, M.; Hainer, V.; Adenovirus 36 infection: a role in dietary intake and response to inpatient weight management in obese girls. International Journal of Obesity, 2015, Roč. 39, č. 12, s.1757-1760. DOI: 10.1038/ijo.2015.167
Dušátková, L.; Zamrazilová, H.; Aldhoon Hainerová, I.; Atkinson, R.; Sedláčková, B.; Lee, Z.; Včelák, J.; Bendlová, B.; Kunešová, M.; Hainer, V.; Association of Adenovirus 36 Infection With Obesity-Related Gene Variants in Adolescents. Physiological Research, 2015, Roč. 64, č. JULY 2015, s.S197-S202.
Dušátková, L.; Zamrazilova, H.; Aldhoon-Hainerova, I.; Sedláčková, B.; Vcelak, J.; Hlavaty, P.; Bendlova, B.; Kunesova, M.; Hainer, V.; A common variant near BDNF is associated with dietary calcium intake in adolescents. Nutrition Research, 2015, Roč. 35, č. 9, s.766-773. DOI: 10.1016/j.nutres.2015.06.004
Škerlová, J.; Král, V.; Kachala, M.; Fábry, M.; Bumba, L.; Svergun, D.; Tošner, Z.; Veverka, V.; Řezáčová, P.; Molecular mechanism for the action of the anti-CD44 monoclonal antibody MEM-85. Journal of Structural Biology, 2015, Roč. 191, č. 2, s.214-223. DOI: 10.1016/j.jsb.2015.06.005
Zíma, V.; Witschas, K.; Hynková, A.; Zimova, L.; Barvík, I.; Vlachova, V.; Structural modeling and patch-clamp analysis of pain-related mutation TRPA1-N855S reveal inter-subunit salt bridges stabilizing the channel open state. Neuropharmacology, 2015, Roč. 93, č. June, s.294-307. DOI: 10.1016/j.neuropharm.2015.02.018
Lynn, G.; Laga, R.; Darrah, P.; Ishizuka, A.; Balaci, A.; Dulcey, A.; Pechar, M.; Pola, R.; Gerner, M.; Yamamoto, A.; Buechler, C.; Quinn, K.; Smelkinson, M.; Vaněk, O.; Cawood, R.; Hills, T.; Vasalatiy, O.; Kastenmueller, K.; Francica, J.; Stutts, L.; Tom, J.; Ryu, K.; Esser-Kahn, A.; Etrych, T.; Fisher, K.; Seymour, L.; Seder, R.; In vivo characterization of the physicochemical properties of polymer-linked TLR agonists that enhance vaccine immunogenicity. Nature Biotechnology, 2015, Roč. 33, č. 11, s.1201-U140. DOI: 10.1038/nbt.3371
Vimberg, V.; Kuzma, M.; Stodůlková, E.; Novák, P.; Bednárová, L.; Šulc, M.; Gažák, R.; Hydnocarpin-Type Flavonolignans: Semisynthesis and Inhibitory Effects on Staphylococcus aureus Biofilm Formation. Journal of Natural Products, 2015, Roč. 78, č. 8, s.2095-2103. DOI: 10.1021/acs.jnatprod.5b00430
Burianová, I.; Bořecká, K.; Routine therapeutic monitoring of the active metabolite of carbamazepine: Is it really necessary?. Clinical Biochemistry, 2015, Roč. 48, č. 13-14, s.866-869. DOI: 10.1016/j.clinbiochem.2015.05.014
Bláha, J.; Pachl, P.; Novák, P.; Vaněk, O.; Expression and purification of soluble and stable ectodomain of natural killer cell receptor LLT1 through high-density transfection of suspension adapted HEK293S GnTI(-) cells. Protein Expression and Purification, 2015, Roč. 109, č. May 2015, s.7-13. DOI: 10.1016/j.pep.2015.01.006
Hasan, S.; Osičková, A.; Bumba, L.; Novák, P.; Šebo, P.; Osička, R.; Interaction of Bordetella adenylate cyclase toxin with complement receptor 3 involves multivalent glycan binding. FEBS Letters, 2015, Roč. 589, č. 3, s.374-379. DOI: 10.1016/j.febslet.2014.12.023
Heger, Z.; ZÍtka, J.; Cernei, N.; Křížková, S.; Sztalmachová, M.; Kopel, P.; Masařík, M.; Hodek, P.; Zítka, O.; Adam, V.; Kizek, R.; 3D-printed biosensor with poly(dimethylsiloxane) reservoir for magnetic separation and quantum dots-based immunolabeling of metallothionein. Electrophoresis, 2015, Roč. 36, č. 11-12, s.1256-1264. DOI: 10.1002/elps.201400559
Heger, Z.; Cernei, N.; Křížková, S.; Masařík, M.; Kopel, P.; Hodek, P.; Zítka, O.; Adam, V.; Kizek, R.; Paramagnetic Nanoparticles as a Platform for FRET-Based Sarcosine Picomolar Detection. Scientific Reports, 2015, Roč. 5, č. March 2015, s.nestránkováno. DOI: 10.1038/srep08868
Purchartová, K.; Valentová, K.; Pelantová, H.; Marhol, P.; Cvačka, J.; Havlíček, L.; Křenková, A.; Vavříková, E.; Biedermann, D.; Chambers, C.; Křen, V.; Prokaryotic and Eukaryotic Aryl Sulfotransferases: Sulfation of Quercetin and Its Derivatives. ChemCatChem, 2015, Roč. 7, č. 19, s.3152-3162. DOI: 10.1002/cctc.201500298
Dušková, M.; Ferreira, C.; Lucas, C.; Sychrová, H.; Two glycerol uptake systems contribute to the high osmotolerance of Zygosaccharomyces rouxii. Molecular Microbiology, 2015, Roč. 97, č. 3, s.541-559. DOI: 10.1111/mmi.13048
Machová, I.; Snášel, J.; Dostál, J.; Brynda, J.; Fanfrlík, J.; Singh, M.; Tarábek, J.; Vaněk, O.; Bednárová, L.; Pichová, I.; Structural and Functional Studies of Phosphoenolpyruvate Carboxykinase from Mycobacterium tuberculosis. PLoS ONE, 2015, Roč. 10, č. 3, s.nestránkováno. DOI: 10.1371/journal.pone.0120682

2014

Kádek, A.; Tretyachenko, V.; Mrázek, H.; Ivanova, L.; Halada, P.; Rey, M.; Schriemer, DC.; Man, P.; Expression and characterization of plant aspartic protease nepenthesin-1 from Nepenthes gracilis. Protein Expression and Purification, 2014, Roč. 95, č. March 2014, s.121-128. DOI: 10.1016/j.pep.2013.12.005
Martínková, M.; Toxický účinek metanolu na lidský organismus. Vesmír, 2014, Roč. 93, č. únor 2014, s.80-83.
Schmeiser, H.; Nortier, J.; Singh, R.; da Costa, G.; Sennesael, J.; Cassuto-Viguier, E.; Ambrosetti, D.; Rorive, S.; Pozdzik, A.; Phillips, D.; Stiborová, M.; Arlt, V.; Exceptionally long- term persistence of DNA adducts formed by carcinogenic aristolochic acid I in renal tissue from patients with aristolochic acid nephropathy. International Journal of Cancer, 2014, Roč. 135, č. 2, s.502-507. DOI: 10.1002/ijc.28681
Tmejová, K.; Krejčová, L.; Hynek, D.; Adam, V.; Babula, P.; Trnková, L.; Stiborová, M.; Eckschlager, T.; Kizek, R.; Electrochemical Study of Ellipticine Interaction with Single and Double Stranded Oligonucleotides. Anti-Cancer Agents in Medicinal Chemistry, 2014, Roč. 14, č. 2, s.331-340. DOI: 10.2174/18715206113139990316
Blažková, I.; Vaculovičová, M.; Eckschlager, T.; Stiborová, M.; Trnková, L.; Adam, V.; Kizek, R.; Study of fluorescence of doxorubicin in muscle tissue using highly sensitive fluorescence sensing. Chemical Sensors, 2014, Roč. 4, č. Neuveden, s.nestránkováno.
Kádek, A.; Mrázek, H.; Halada, P.; Rey, M.; Schriemer, D.; Man, P.; Aspartic Protease Nepenthesin-1 as a Tool for Digestion in Hydrogen/Deuterium Exchange Mass Spectrometry. Analytical Chemistry, 2014, Roč. 86, č. 9, s.4287-4294. DOI: 10.1021/ac404076j
Stiborová, M.; Frei, E.; Arlt, V.; Schmeiser, H.; Knockout and humanized mice as suitable tools to identify enzymes metabolizing the human carcinogen aristolochic acid. "Xenobiotica; the fate of foreign compounds in biological systems", 2014, Roč. 44, č. 2, s.135-145. DOI: 10.3109/00498254.2013.848310
Halecký, M.; Špačková, R.; Páca, J.; Stiborová, M.; Kozliak, E.; Biodegradation of nitroglycerin and ethylene glycol dinitrate by free and immobilized mixed cultures. Water Research, 2014, Roč. 48, č. January, s.529-537. DOI: 10.1016/j.watres.2013.10.004
Stiborová, M.; Frei, E.; Ellipticines as DNA-Targeted Chemotherapeutics. Current Medicinal Chemistry, 2014, Roč. 21, č. 5, s.575-591. DOI: 10.2174/09298673113206660272
Hraběta, J.; Stiborová, M.; Adam, V.; Kizek, R.; Eckschlager, T.; Histone deacetylase inhibitors in cancer therapy. A review. Biomedical Papers, 2014, Roč. 158, č. 2, s.161-169. DOI: 10.5507/bp.2013.085
Gumulec, J.; Balvan, J.; Sztalmachová, M.; Raudenská, M.; Dvořáková, V.; Knopfová, L.; Polanská, H.; Hudcová, K.; Ruttkay-Nedecký, B.; Babula, P.; Adam, V.; Kizek, R.; Stiborová, M.; Masařík, M.; Cisplatin-resistant prostate cancer model: Differences in antioxidant system, apoptosis and cell cycle. International Journal of Oncology, 2014, Roč. 44, č. 3, s.923-933. DOI: 10.3892/ijo.2013.2223
Stiborová, M.; Levová, K.; Bárta, F.; Šulc, M.; Frei, E.; Arlt, V.; Schmeiser, H.; The influence of dicoumarol on the bioactivation of the carcinogen aristolochic acid I in rats. Mutagenesis, 2014, Roč. 29, č. 3, s.189-200. DOI: 10.1093/mutage/geu004
Stiborová, M.; Moserová, M.; Černá, V.; Indra, R.; Dračínský, M.; Šulc, M.; Henderson, C.; Wolf, C.; Schmeiser, H.; Phillips, D.; Frei, E.; Arlt, V.; Cytochronne b(5) and epoxide hydrolase contribute to benzo[a]pyrene-DNA adduct formation catalyzed by cytochrome P450 1A1 under low NADPH:P450 oxidoreductase conditions. Toxicology, 2014, Roč. 318, č. APR 6 2014, s.1-12. DOI: 10.1016/j.tox.2014.02.002
Poljaková, J.; Groh, T.; Omaňa Gudiňo, Ž.; Hraběta, J.; Bořek Dohalská, L.; Kizek, R.; Doktorová, H.; Eckschlager, T.; Stiborová, M.; Hypoxia-mediated histone acetylation and expression of N-myc transcription factor dictate aggressiveness of neuroblastoma cells. Oncology Reports, 2014, Roč. 31, č. 4, s.1928-1934. DOI: 10.3892/or.2014.2999
Stiborová, M.; Frei, E.; Schmeiser, HH.; Arlt, VM.; Martínek, V.; Mechanisms of Enzyme-Catalyzed Reduction of Two Carcinogenic Nitro-Aromatics, 3-Nitrobenzanthrone and Aristolochic Acid I: Experimental and Theoretical Approaches. International Journal of Molecular Sciences, 2014, Roč. 15, č. 6, s.10271-10295. DOI: 10.3390/ijms150610271
Bárta, F.; Levová, K.; Frei, E.; Schmeiser, H.; Arlt, V.; Stiborová, M.; The effect of aristolochic acid I on expression of NAD(P)H:quinone oxidoreductase in mice and rats-A comparative study. Mutation Research - Genetic Toxicology and Environmental Mutagenesis, 2014, Roč. 768, č. JUL 1 2014, s.1-7. DOI: 10.1016/j.mrgentox.2014.01.012
Stráňava, M.; Martínková, M.; Stiborová, M.; Man, P.; Kitanishi, K.; Muchová, L.; Vítek, L.; Martínek, V.; Shimizu, T.; Introduction of water into the heme distal side by Leu65 mutations of an oxygen sensor, YddV, generates verdoheme and carbon monoxide, exerting the heme oxygenase reaction. Journal of Inorganic Biochemistry, 2014, Roč. 140, č. NOV 2014, s.29-38. DOI: 10.1016/j.jinorgbio.2014.06.010
Stiborová, M.; Poljaková, J.; Mrízová, I.; Bořek Dohalská, L.; Eckschlager, T.; Adam, V.; Kizek, R.; Frei, E.; Expression Levels of Enzymes Metabolizing an Anticancer Drug Ellipticine Determined by Electromigration Assays Influence its Cytotoxicity to Cancer Cells - A Comparative Study. International Journal of Electrochemical Science, 2014, Roč. 9, č. 16 July 2014, s.5675-5689.
Jeřábek, P.; Florián, J.; Stiborová, M.; Martínek, V.; Flexible docking-based molecular dynamics/steered molecular dynamics calculations of protein-protein contacts in a complex of cytochrome P450 1A2 with cytochrome b5. Biochemistry, 2014, Roč. 53, č. 42, s.6695-6705. DOI: 10.1021/bi500814t
Bořek Dohalská, L.; Valášková, P.; Černá, V.; Stiborová, M.; Role of rat cytochromes P450 in the oxidation of 17α-ethinylestradiol. Environmental Toxicology and Pharmacology, 2014, Roč. 38, č. 3, s.852-860. DOI: 10.1016/j.etap.2014.10.004
Konečná, R.; Nguyen, HV.; Stanisavljević, M.; Blažková, I.; Křížková, S.; Vaculovičová, M.; Stiborová, M.; Eckschlager, T.; Zítka, O.; Adam, V.; Kizek, R.; Doxorubicin Encapsulation Investigated by Capillary Electrophoresis with Laser-Induced Fluorescence Detection. Chromatographia, 2014, Roč. 77, č. 21-22, s.1469-1476. DOI: 10.1007/s10337-014-2733-6
Anzenbacher, P.; Marchal, S.; Palacký, J.; Anzenbacherová, E.; Domaschke, T.; Lange, R.; Shimizu, T.; Kitanishi, K.; Stráňava, M.; Stiborová, M.; Martínková, M.; Pressure effects reveal that changes in the redox states of the heme iron complexes in the sensor domains of two heme-based oxygen sensor proteins, Ec DOS and YddV, have profound effects on their flexibility. FEBS Journal, 2014, Roč. 281, č. 23, s.5208-5219. DOI: 10.1111/febs.13060
Bubnová, M.; Zemančíková, J.; Sychrová, H.; Osmotolerant yeast species differ in basic physiological parameters and in tolerance of non-osmotic stresses. Yeast, 2014, Roč. 31, č. 8, s.309-321. DOI: 10.1002/yea.3024
Čujová, S.; Bednarová, L.; Slaninová, J.; Straka, J.; Čeřovský, V.; Interaction of a novel antimicrobial peptide isolated from the venom of solitary bee Colletes daviesanus with phospholipid vesicles and Escherichia coli cells. Journal of Peptide Science, 2014, Roč. 20, č. 11, s.885-895. DOI: 10.1002/psc.2681
Monincová, L.; Buděšínský, M.; Čujová, S.; Čeřovský, V.; Veverka, V.; Structural Basis for Antimicrobial Activity of Lasiocepsin. Chembiochem : a European journal of chemical biology, 2014, Roč. 15, č. 2, s.301-308. DOI: 10.1002/cbic.201300509
Bradnová, O.; Kyrou, I.; Hainer, V.; Včelák, J.; Hálková, T.; Šrámková, P.; Doležalová, K.; Fried, M.; McTernan, P.; Kumar, S.; Hill, M.; Kunešová, M.; Bendlová, B.; Vrbíková, J.; Laparoscopic Greater Curvature Plication in Morbidly Obese Women with Type 2 Diabetes: Effects on Glucose Homeostasis, Postprandial Triglyceridemia and Selected Gut Hormones. Obesity Surgery, 2014, Roč. 24, č. 5, s.718-726. DOI: 10.1007/s11695-013-1143-4
Ptáčková, R.; Ječmen, T.; Novák, P.; Hudeček, J.; Stiborová, M.; Šulc, M.; The Application of an Emerging Technique for Protein-Protein Interaction Interface Mapping: The Combination of Photo-Initiated Cross-Linking Protein Nanoprobes with Mass Spectrometry. International Journal of Molecular Sciences, 2014, Roč. 15, č. 6, s.9224-9241. DOI: 10.3390/ijms15069224
Linhartová, M.; Bučinská, L.; Halada, P.; Ječmen, T.; Šetlík, J.; Komenda, J.; Sobotka, R.; Accumulation of the Type IV prepilin triggers degradation of SecY and YidC and inhibits synthesis of Photosystem II proteins in the cyanobacterium Synechocystis PCC 6803. Molecular Microbiology, 2014, Roč. 93, č. 6, s.1207-1223. DOI: 10.1111/mmi.12730
Knedlík, T.; Navrátil, V.; Vik, V.; Pacík, D.; Šácha, P.; Konvalinka, J.; Detection and quantitation of glutamate carboxypeptidase II in human blood. Prostate, 2014, Roč. 74, č. 7, s.768-780. DOI: 10.1002/pros.22796
Navrátil, M.; Ptáček, J.; Šácha, P.; Starková, J.; Lubkowski, J.; Bařinka, C.; Konvalinka, J.; Structural and biochemical characterization of the folyl-poly-gamma-L-glutamate hydrolyzing activity of human glutamate carboxypeptidase II. FEBS Journal, 2014, Roč. 281, č. 14, s.3228-3242. DOI: 10.1111/febs.12857
Kopecka, M.; Kosek, D.; Kukacka, Z.; Rezabkova, L.; Man, P.; Novak, P.; Obsil, T.; Obsilova, V.; Role of the EF-hand like motif in the 14-3-3 protein-mediated activation of yeast neutral trehalase Nth1. J. Biol. Chem., 2014, Roč. 289, č. 20, s.13948-13961. DOI: 10.1074/jbc.M113.544551
Stiborová, M.; Manhartová, Z.; Hodek, P.; Adam, V.; Kizek, R.; Frei, E.; Formation of DNA Adducts by Ellipticine and Its Micellar Form in Rats - A Comparative Study. Sensors, 2014, Roč. 14, č. 12, s.22982-22997. DOI: 10.3390/s141222982
Ječmen, T.; Ptáčková, R.; Kavan, D.; Černá, V.; Hodek, P.; Stiborová, M.; Hudeček, J.; Šulc, M.; Quantification of interactions between cytochrome P450 2B4 and cytochrome b5 in a functional membrane complex. Neuroendocrinology Letters, 2014, Roč. 35, č. Suppl.2, s.114-122.
Novotná, M.; Gažák, R.; Biedermann, D.; Di Meo, F.; Marhol, P.; Kuzma, M.; Bednárová, L.; Fuksová, K.; Trouillas, P.; Křen, V.; cis-trans Isomerization of silybins A and B. Beilstein Journal of Organic Chemistry, 2014, Roč. 10, č. May 8 2014, s.1047-1063. DOI: 10.3762/bjoc.10.105
Grantz Šašková, K.; Kožíšek, M.; Stray, K.; de Jong, D.; Řezáčová, P.; Brynda, J.; van Maarseveen, N.; Nijhuis, M.; Cihlář, T.; Konvalinka, J.; GS-8374, a Prototype Phosphonate-Containing Inhibitor of HIV-1 Protease, Effectively Inhibits Protease Mutants with Amino Acid Insertions. Journal of Virology, 2014, Roč. 88, č. 6, s.3586-3590. DOI: 10.1128/JVI.02688-13
Kožíšek, M.; Lepšík, M.; Grantz Šašková, K.; Brynda, J.; Konvalinka, J.; Řezáčová, P.; Thermodynamic and structural analysis of HIV protease resistance to darunavir - analysis of heavily mutated patient- derived HIV-1 proteases. FEBS Journal, 2014, Roč. 281, č. 7, s.1834-1847. DOI: 10.1111/febs.12743
Hýsková, V.; Miedzińska, L.; Dobrá, J.; Vaňková, R.; Ryšlavá, H.; Phosphoenolpyruvate carboxylase, NADP-malic enzyme, and pyruvate, phosphate dikinase are involved in the acclimation of Nicotiana tabacum L. to drought stress. Journal of Plant Physiology, 2014, Roč. 171, č. 5, s.19-25. DOI: 10.1016/j.jplph.2013.10.017
Ryšlavá, H.; Valenta, R.; Hýsková, V.; Křížek, T.; Liberda, J.; Coufal, P.; Purification and enzymatic characterization of tobacco leaf β-N-acetylhexosaminidase. Biochimie, 2014, Roč. 107 Part B, č. December 2014, s.263-269. DOI: 10.1016/j.biochi.2014.09.006
Schimer, J.; Konvalinka, J.; Unorthodox Inhibitors of HIV Protease: Looking Beyond Active-site-directed Peptidomimetics. Current Pharmaceutical Design, 2014, Roč. 20, č. 21, s.3389-3397. DOI: 10.2174/13816128113199990634
Tykvart, J.; Schimer, J.; Bařinková, J.; Pachl, P.; Poštová-Slavětínská, L.; Majer, P.; Konvalinka, J.; Šácha, P.; Rational design of urea-based glutamate carboxypeptidase II (GCPII) inhibitors as versatile tools for specific drug targeting and delivery. Bioorganic and Medicinal Chemistry, 2014, Roč. 22, č. 15, s.4099-4108. DOI: 10.1016/j.bmc.2014.05.061
Tykvart, J.; Navrátil, V.; Sedlák, F.; Corey, E.; Colombatti, M.; Fracasso, G.; Koukolík, F.; Bařinka, C.; Šácha, P.; Konvalinka, J.; Comparative analysis of monoclonal antibodies against prostate-specific membrane antigen (PSMA). Prostate, 2014, Roč. 74, č. 16, s.1674-1690. DOI: 10.1002/pros.22887
Mattei, S.; Anders, M.; Konvalinka, J.; Kraeuesslich, H.; Briggs, J.; Mueller, B.; Induced Maturation of Human Immunodeficiency Virus. Journal of Virology, 2014, Roč. 88, č. 23, s.13722-13731. DOI: 10.1128/JVI.02271-14
Trčka, F.; Ďurech, M.; Man, P.; Hernychová, L.; Muller, P.; Vojtěšek, B.; The Assembly and Intermolecular Properties of the Hsp70-Tomm34-Hsp90 Molecular Chaperone Complex*. Journal of Biological Chemistry, 2014, Roč. 289, č. 14, s.9887-9901. DOI: 10.1074/jbc.M113.526046
Diotti, R.; Mancini, N.; Clementi, N.; Sautto, G.; Moreno, G.; Criscuolo, E.; Cappelletti, F.; Man, P.; Forest, E.; Remy, L.; Giannecchini, S.; Clementi, M.; Burioni, R.; Cloning of the first human anti-JCPyV/VP1 neutralizing monoclonal antibody: Epitope definition and implications in risk stratification of patients under natalizumab therapy. Antiviral Research, 2014, Roč. 108, č. August 2014, s.94-103. DOI: 10.1016/j.antiviral.2014.05.017
Řeha, D.; Harish, B.; Sinha, D.; Kukačka, Z.; McSally, J.; Ettrichová, O.; Novák, P.; Carey, J.; Ettrich, R.; Molecular dynamics comparison of E. coli WrbA apoprotein and holoprotein. Journal of Molecular Modeling, 2014, Roč. 20, č. 9, s.nestránkováno. DOI: 10.1007/s00894-014-2400-8
Pompach, P.; Ashline, D.; Brnáková, Z.; Benicky, J.; Sanda, M.; Goldman, R.; Protein and Site Specificity of Fucosylation in Liver-Secreted Glycoproteins. Journal of Proteome Research, 2014, Roč. 13, č. 12, s.5561-5569. DOI: 10.1021/pr5005482
Benicky, J.; Sanda, M.; Pompach, P.; Wu, J.; Goldman, R.; Quantification of Fucosylated Hemopexin and Complement Factor H in Plasma of Patients with Liver Disease. Analytical Chemistry, 2014, Roč. 86, č. 21, s.10716-10723. DOI: 10.1021/ac502727s
Rozbeský, D.; Krejzová, J.; Křenek, K.; Prchal, J.; Hrabal, R.; Kožíšek, M.; Weignerová, L.; Fiore, M.; Dumy, P.; Renaudet, O.; Křen, V.; Re-Evaluation of Binding Properties of Recombinant Lymphocyte Receptors NKR-P1A and CD69 to Chemically Synthesized Glycans and Peptides. International Journal of Molecular Sciences, 2014, Roč. 15, č. 1, s.1271-1283. DOI: 10.3390/ijms15011271
Hodek, P.; Fousová, P.; Brabencová, E.; Moserová, M.; Pávek, P.; Anzenbacherová, E.; Brotánek, J.; Hudeček, J.; Frei, E.; Stiborová, M.; Effect of dihydromyricetin on benzo[a]pyrene activation in rats. Neuroendocrinology Letters, 2014, Roč. 35, č. Suppl. 2, s.158-168.
Pechar, M.; Pola, R.; Laga, R.; Braunová, A.; Filippov, S.; Bogomolova, A.; Bednárová, L.; Vaněk, O.; Ulbrich, K.; Coiled Coil Peptides and Polymer-Peptide Conjugates: Synthesis, Self-Assembly, Characterization and Potential in Drug Delivery Systems. Biomacromolecules, 2014, Roč. 15, č. 7, s.2590-2599. DOI: 10.1021/bm500436p
Kubíčková, B.; Majerová, B.; Hadrabová, J.; Nosková, L.; Stiborová, M.; Hodek, P.; Effect of chicken antibodies on inflammation in human lung epithelial cell lines. Neuroendocrinology Letters, 2014, Roč. 35, č. Suppl. 2, s.99-104.
Indra, R.; Moserová, M.; Kroftová, N.; Šulc, M.; Martínková, M.; Adam, V.; Eckschlager, T.; Kizek, R.; Arlt, VM.; Stiborová, M.; Modulation of human cytochrome P450 1A1-mediated oxidation of benzo[a]pyrene by NADPH:cytochrome P450 oxidoreductase and cytochrome b5. Neuroendocrinology Letters, 2014, Roč. 35, č. Suppl. 2, s.105-113.
Stiborová, M.; Levová, K.; Bárta, F.; Dračínská, H.; Šulc, M.; Hodek, P.; Frei, E.; Arlt, VM.; Schmeiser, HH.; Dicoumarol inhibits rat NAD(P)H:quinone oxidoreductase in vitro and induces its expression in vivo. Neuroendocrinology Letters, 2014, Roč. 35, č. Suppl. 2, s.123-132.
Gumulec, J.; Fojtu, M.; Raudenská, M.; Sztalmachová, M.; Skotáková, A.; Vlachová, J.; Skaličková, S.; Nejdl, L.; Kopel, P.; Knopfová, L.; Adam, V.; Kizek, R.; Stiborová, M.; Babula, P.; Masařík, M.; Modulation of Induced Cytotoxicity of Doxorubicin by Using Apoferritin and Liposomal Cages. International Journal of Molecular Sciences, 2014, Roč. 15, č. 12, s.22960-22977. DOI: 10.3390/ijms151222960
Raudenská, M.; Balvan, J.; Gumulec, J.; Sztalmachová, M.; Polanská, H.; Adam, V.; Stiborová, M.; Eckschlager, T.; Kizek, R.; Masařík, M.; Molekulární mechanismy rezistence u nádorového onemocnění prostaty. Praktický lékař, 2014, Roč. 94, č. 2, s.87-92.
Rinágelová, A.; Kaplan, O.; Veselá, A.; Chmátal, M.; Křenková, A.; Plíhal, O.; Pasquarelli, F.; Cantarella, M.; Martínková, L.; Cyanide hydratase from Aspergillus niger K10: Overproduction in Escherichia coli, purification, characterization and use in continuous cyanide degradation. Process Biochemistry, 2014, Roč. 49, č. 3, s.445-450. DOI: 10.1016/j.procbio.2013.12.008
Marešová, H.; Plačková, M.; Grulich, M.; Kyslík, P.; Current state and perspectives of penicillin G acylase-based biocatalyses. Applied Microbiology and Biotechnology, 2014, Roč. 98, č. 7, s.2867-2879. DOI: 10.1007/s00253-013-5492-7
Charrier, C.; Azerad, R.; Marhol, P.; Purchartová, K.; Kuzma, M.; Křen, V.; Preparation of silybin phase II metabolites: Streptomyces catalyzed glucuronidation. Journal of Molecular Catalysis - B Enzymatic, 2014, Roč. 102, č. April 2014, s.167-173. DOI: 10.1016/j.molcatb.2014.02.008
Jílková, A.; Horn, M.; Řezáčová, P.; Marešová, L.; Fajtová, P.; Brynda, J.; Vondrášek, J.; McKerrow, J.; Caffrey, C.; Mareš, M.; Activation Route of the Schistosoma mansoni Cathepsin B1 Drug Target: Structural Map with a Glycosaminoglycan Switch. Structure, 2014, Roč. 22, č. 12, s.1786-1798. DOI: 10.1016/j.str.2014.09.015
Horn, M.; Jílková, A.; Mareš, M.; Katepsinové proteasy v patologii. Chemické listy, 2014, Roč. 108, č. 4, s.358-363.
Aldhoon-Hainerová, I.; Zamrazilová, H.; Dušátková, L.; Sedláčková, B.; Hlavatý, P.; Hill, M.; Hampl, R.; Kunešová, M.; Hainer, V.; Glucose homeostasis and insulin resistance: prevalence, gender differences and predictors in adolescents. Diabetology and Metabolic Syndrome, 2014, Roč. 6, č. September 2014, s.nestránkováno. DOI: 10.1186/1758-5996-6-100
Škerlová, J.; Král, V.; Fábry, M.; Sedláček, J.; Veverka, V.; Řezáčová, P.; Optimization of the crystallizability of a single-chain antibody fragment. Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2014, Roč. 70, č. December 2014, s.1701-1706. DOI: 10.1107/S2053230X1402247X
Čeřovská, N.; Plchová, H.; Vaculík, P.; Moravec, T.; Gichner, T.; Potato virus X induces DNA damage in leaf nuclei of the host plant Nicotiana tabacum L. var. xanthi. Biologia Plantarum, 2014, Roč. 58, č. 4, s.783-787. DOI: 10.1007/s10535-014-0448-z
Aldhoon Hainerová, I.; Zamrazilová, H.; Atkinson, R.; Dušátková, L.; Sedláčková, B.; Hlavatý, P.; Lee, Z.; Kunešová, M.; Hainer, V.; Clinical and laboratory characteristics of 1179 Czech adolescents evaluated for antibodies to human adenovirus 36. International Journal of Obesity, 2014, Roč. 38, č. 2, s.285-291. DOI: 10.1038/ijo.2013.72
Stiborová, M.; Schmeiser, HH.; Frei, E.; Hodek, P.; Martínek, V.; Enzymes Oxidizing the Azo Dye 1-Phenylazo-2-Naphthol (Sudan I) and their Contribution to its Genotoxicity and Carcinogenicity. Current Drug Metabolism, 2014, Roč. 15, č. 8, s.829-840. DOI: 10.2174/1389200216666150206125442
Šulc, M.; Stiborová, M.; VĚDECKO-PEDAGOGICKÉ ODPOLEDNE U PŘÍLEŽITOSTI 60. VÝROČÍ ZALOŽENÍ KATEDRY BIOCHEMIE PŘÍRODOVĚDECKÉ FAKULTY UK. Bioprospect, 2014, Roč. 24, č. 1, s.4-4.
Dráb, T.; Kračmerová, J.; Hanzlíková, E.; Černá, T.; Litváková, R.; Pohlová, A.; Tichá, M.; Přikryl, P.; Liberda, J.; The antimicrobial action of histones in the reproductive tract of cow. Biochemical and Biophysical Research Communications, 2014, Roč. 443, č. 3, s.987-990. DOI: 10.1016/j.bbrc.2013.12.077
Michalkova, Z.; Komarek, M.; Sillerova, H.; Della Puppa, L.; Joussein, E.; Bordas, F.; Vanek, A.; Vaněk, O.; Ettler, V.; Evaluating the potential of three Fe- and Mn-(nano)oxides for the stabilization of Cd, Cu and Pb in contaminated soils. Journal of Environmental Management, 2014, Roč. 146, č. DECEMBER, s.226-234. DOI: 10.1016/j.jenvman.2014.08.004
Zoll, S.; Stanchev, S.; Began, J.; Škerle, J.; Lepsik, M.; Peclinovská, L.; Majer, P.; Strisovsky, K.; Substrate binding and specificity of rhomboid intramembrane protease revealed by substrate-peptide complex structures. EMBO Journal, 2014, Roč. 33, č. 20, s.2408-2421. DOI: 10.15252/embj.201489367

2013

Mácová, I.; Křížková, J.; Franková, J.; Šulc, M.; Stiborová, M.; Hodek, P.; Keratin Cross-reactivity in Electro-transfer (Western blot): How to Suppress It. International Journal of Electrochemical Science, 2013, Roč. 8, č. 2, s.1551-1558.
Stiborová, M.; Dračínská, H.; Martínek, V.; Svášková, D.; Hodek, P.; Milichovský, J.; Hejduková, Ž.; Brotánek, J.; Schmeiser, H.; Frei, E.; Induced Expression of Cytochrome P450 1A and NAD(P)H:Quinone Oxidoreductase Determined at mRNA, Protein, and Enzyme Activity Levels in Rats Exposed to the Carcinogenic Azo Dye 1-Phenylazo-2-naphthol (Sudan I). Chemical Research in Toxicology, 2013, Roč. 26, č. 2, s.290-299. DOI: 10.1021/tx3004533
Mrázek, H.; Weignerová, L.; Bojarová, P.; Novák, P.; Vaněk, O.; Bezouška, K.; Carbohydrate synthesis and biosynthesis technologies for cracking of the glycan code: Recent advances. Biotechnology Advances, 2013, Roč. 31, č. 1, s.17-37. DOI: 10.1016/j.biotechadv.2012.03.008
Pokorná, J.; Heyda, J.; Konvalinka, J.; Ion specific effects of alkali cations on the catalytic activity of HIV-1 protease. Faraday Discussions, 2013, Roč. 160, č. leden 2013, s.359-370. DOI: 10.1039/c2fd20094e
Gažák, R.; Trouillas, P.; Biedermann, D.; Fuksová, K.; Marhol, P.; Kuzma, M.; Křen, V.; Base-catalyzed oxidation of silybin and isosilybin into 2,3-dehydro derivatives. Tetrahedron Letters, 2013, Roč. 54, č. 4, s.315-317. DOI: 10.1016/j.tetlet.2012.11.049
Gažák, R.; Fuksová, K.; Marhol, P.; Kuzma, M.; Agarwal, R.; Křen, V.; Preparative method for isosilybin isolation based on enzymatic kinetic resolution of silymarin mixture. Process Biochemistry, 2013, Roč. 48, č. 1, s.184-189. DOI: 10.1016/j.procbio.2012.11.006
Rozbeský, D.; Sovová, Ž.; Marcoux, J.; Man, P.; Ettrich, R.; Robinson, C.; Novák, P.; Structural Model of Lymphocyte Receptor NKR-P1C Revealed by Mass Spectrometry and Molecular Modeling. Analytical Chemistry, 2013, Roč. 85, č. 3, s.1597-1604. DOI: 10.1021/ac302860m
Doubnerová, V.; Is Drinking of Coffee and Using Of Cardamom in the Kitchen Beneficial for our Health?. Biochemistry & Analytical Biochemistry, 2013, Roč. 2, č. 1, s.nestránkováno. DOI: 10.4172/2161-1009.1000e134
Koberová, M.; Ječmen, T.; Šulc, M.; Černá, V.; Kizek, R.; Hudeček, J.; Stiborová, M.; Hodek, P.; Photo-cytochrome b(5) - A New Tool to Study the Cytochrome P450 Electron-transport Chain. International Journal of Electrochemical Science, 2013, Roč. 8, č. 1, s.125-134.
Vranová, I.; Moserová, M.; Hodek, P.; Kizek, R.; Frei, E.; Stiborová, M.; The Anticancer Drug Ellipticine Induces Cytochromes P450 1A1, 1A2 and 3A, Cytochrome b(5) and NADPH:Cytochrome P450 Oxidoreductase in Rat Liver, Kidney and Lung. International Journal of Electrochemical Science, 2013, Roč. 8, č. 2, s.1586-1597.
Poljaková, J.; Eckschlager, T.; Cinatl, J.; Kizek, R.; Frei, E.; Stiborová, M.; Electrochemical Determination of Enzymes Metabolizing Ellipticine in Thyroid Cancer Cells - a Tool to Explain the Mechanism of Ellipticine Toxicity to these Cells. International Journal of Electrochemical Science, 2013, Roč. 8, č. 2, s.1573-1585.
Hodek, P.; Trefil, P.; Šimůnek, J.; Hudeček, J.; Stiborová, M.; Optimized Protocol of Chicken Antibody (IgY) Purification Providing Electrophoretically Homogenous Preparations. International Journal of Electrochemical Science, 2013, Roč. 8, č. 1, s.113-124.
Halecký, M.; Karlová, P.; Páca, J.; Stiborová, M.; Kozliak, EI.; Bajpai, R.; Sedláček, I.; Biodegradation of a mixture of mononitrophenols in a packed-bed aerobic reactor. Journal of Environmental Science and Health - Part A Toxic/Hazardous Substances and Environmental Engineering, 2013, Roč. 48, č. 9, s.989-999. DOI: 10.1080/10934529.2013.773195
Zítka, O.; Komínková, M.; Skaličková, S.; Škutková, H.; Provazník, I.; Eckschlager, T.; Stiborová, M.; Trnková, L.; Adam, V.; Kizek, R.; Single Amino Acid Change in Metallothionein Metal-Binding Cluster Influences Interaction with Cisplatin. International Journal of Electrochemical Science, 2013, Roč. 8, č. 2, s.2625-2634.
Kenšová, R.; Kremplová, M.; Šmerková, K.; Zítka, O.; Hynek, D.; Adam, V.; Beklová, M.; Trnková, L.; Stiborová, M.; Eckschlager, T.; Hubálek, J.; Kizek, R.; Interactions of Platinum-Based Cytostatics with Metallothionein Revealed by Electrochemistry. International Journal of Electrochemical Science, 2013, Roč. 8, č. 4, s.4472-4484.
Goekmen, M.; Cosyns, J.; Arlt, V.; Stiborová, M.; Phillips, D.; Schmeiser, H.; Simmonds, M.; Cook, H.; Vanherweghem, J.; Nortier, J.; Lord, G.; The Epidemiology, Diagnosis, and Management of Aristolochic Acid Nephropathy A Narrative Review. Annals of Internal Medicine, 2013, Roč. 158, č. 6, s.469-U132.
Ruttkay-Nedecký, B.; Nejdl, L.; Gumulec, J.; Zítka, O.; Masařík, M.; Eckschlager, T.; Stiborová, M.; Adam, V.; Kizek, R.; The Role of Metallothionein in Oxidative Stress. International Journal of Molecular Sciences [online], 2013, Roč. 14, č. 3, s.6044-6066. DOI: 10.3390/ijms14036044
Demo, G.; Fliedrová, B.; Weignerová, L.; Wimmerová, M.; Crystallization and preliminary X-ray crystallographic analysis of recombinant -mannosidase from Aspergillus niger. Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2013, Roč. 69, č. March 1 (part 3), s.288-291. DOI: 10.1107/S1744309113002522
Sedlák, F.; Šácha, P.; Blechová, M.; Březinová, A.; Šafařík, M.; Šebestík, J.; Konvalinka, J.; Glutamate carboxypeptidase II does not process amyloid-beta peptide. FASEB Journal, 2013, Roč. 27, č. 7, s.2626-2632. DOI: 10.1096/fj.12-225094
Stiborová, M.; Černá, V.; Moserová, M.; Arlt, VM.; Frei, E.; The effect of benzo[a]pyrene on metabolic activation of anticancer drug ellipticine in mice. Neuroendocrinology Letters, 2013, Roč. 34, č. Suppl2, s.43-54.
Ryšlavá, H.; Doubnerová, V.; Kavan, D.; Vaněk, O.; Effect of posttranslational modifications on enzyme function and assembly. Journal of Proteomics, 2013, Roč. 92, č. Special issue SI, s.80-109. DOI: 10.1016/j.jprot.2013.03.025
Doubnerová, V.; Ryšlavá, H.; Gaur, RK.; Pradeep, S.; Roles of Hsp70 in Plant Abiotic Stress. Molecular Approaches in Plant Abiotic Stress, 2013, , , s.44-66.
Hýsková, V.; Ryšlavá, H.; Tobacco Hatch-Slack enzymes are involved in both, abiotic and biotic stress response. Biochemistry & Analytical Biochemistry, 2013, Roč. 2, č. 4, s.nestránkováno. DOI: 10.4172/2161-1009.1000e145
Landa, P.; Kutil, Z.; Temml, V.; Malík, J.; Kokoška, L.; Widowitz, U.; Přibylová, M.; Dvořáková, M.; Maršík, P.; Schuster, D.; Bauer, R.; Vaněk, T.; Inhibition of In Vitro Leukotriene B-4 Biosynthesis in Human Neutrophil Granulocytes and Docking Studies of Natural Quinones. Natural product communications, 2013, Roč. 8, č. 1, s.105-108.
Doubnerová, V.; Ryšlavá, H.; Enzyme Regulation during Plant Stress. Biochemistry & Analytical Biochemistry, 2013, Roč. 2, č. 3, s.nestránkováno. DOI: 10.4172/2161-1009.1000e141
Stiborová, M.; Martínek, V.; Frei, E.; Arlt, V.; Schmeiser, H.; Enzymes Metabolizing Aristolochic Acid and their Contribution to the Development of Aristolochic Acid Nephropathy and Urothelial Cancer. Current Drug Metabolism, 2013, Roč. 14, č. 6, s.695-705.
Schmeiser, HH.; Stiborová, M.; Arlt, VM.; Dhawan, A.; Bajpayee, M.; 32P-Postlabeling Analysis of DNA Adducts. Genotoxicity Assessment - Methods and Protocols, 2013, s.389-401. DOI: 10.1007/978-1-62703-529-3_21
Blažková, I.; Nguyen, HV.; Dostálová, S.; Kopel, P.; Stanisavljević, M.; Vaculovičová, M.; Stiborová, M.; Eckschlager, T.; Kizek, R.; Adam, V.; Apoferritin Modified Magnetic Particles as Doxorubicin Carriers for Anticancer Drug Delivery. International Journal of Molecular Sciences, 2013, Roč. 14, č. 7, s.13391-13402. DOI: 10.3390/ijms140713391
Cernei, N.; Heger, Z.; Gumulec, J.; Zítka, O.; Masařík, M.; Babula, P.; Eckschlager, T.; Stiborová, M.; Kizek, R.; Adam, V.; Sarcosine as a Potential Prostate Cancer Biomarker-A Review. International Journal of Molecular Sciences, 2013, Roč. 14, č. 7, s.13893-13908. DOI: 10.3390/ijms140713893
Halecký, M.; Páca, J.; Stiborová, M.; Kozliak, E.; Mašlaňová, I.; Pollutant interactions during the biodegradation of phenolic mixtures with either 2- or 3-mononitrophenol in a continuously operated packed bed reactor. Journal of Environmental Science and Health - Part A Toxic/Hazardous Substances and Environmental Engineering, 2013, Roč. 48, č. 13, s.1609-1618. DOI: 10.1080/10934529.2013.815082
Blažková, I.; Ryvolová, M.; Křížková, S.; Jílková, E.; Kopel, P.; Eckschlager, T.; Stiborová, M.; Adam, V.; Kizek, R.; Moderní zobrazovací techniky pro antracyklinová cytostatika – literární přehled. Klinická onkologie, 2013, Roč. 26, č. 4, s.239-244.
Hodek, P.; Koblihová, J.; Kizek, R.; Frei, E.; Arlt, V.; Stiborová, M.; The relationship between DNA adduct formation by benzo[a]pyrene and expression of its activation enzyme cytochrome P450 1A1 in rat. Environmental Toxicology and Pharmacology, 2013, Roč. 36, č. 3, s.989-996. DOI: 10.1016/j.etap.2013.09.004
Heger, Z.; Cernei, N.; Kudr, J.; Gumulec, J.; Blažková, I.; Zítka, O.; Eckschlager, T.; Stiborová, M.; Adam, V.; Kizek, R.; A Novel Insight into the Cardiotoxicity of Antineoplastic Drug Doxorubicin. International Journal of Molecular Sciences, 2013, Roč. 14, č. 11, s.21629-21646. DOI: 10.3390/ijms141121629
Indra, R.; Moserová, M.; Šulc, M.; Frei, E.; Stiborová, M.; Oxidation of carcinogenic benzo[a]pyrene by human and rat cytochrome P450 1A1 and its influencing by cytochrome b5 - a comparative study. Neuroendocrinology Letters, 2013, Roč. 34, č. Suppl 2, s.55-63.
Brotánek, J.; Ort, M.; Kubánek, M.; Stiborová, M.; Alcoholic liver cirrhosis increases the risk of left ventricular diastolic dysfunction. Neuroendocrinology Letters, 2013, Roč. 34, č. Suppl 2, s.64-70.
Šetlíková, E.; Sofrová, D.; Kovář, V.; Budáč, P.; Isolation and characterization of oxygen-evolving photosystem II particles and photosystem II core complex from the filamentous cyanobacterium Spirulina platensis. Photosynthetica, 2013, Roč. 51, č. 4, s.517-530. DOI: 10.1007/s11099-013-0051-0
Purchartová, K.; Engels, L.; Marhol, P.; Šulc, M.; Kuzma, M.; Slámová, K.; Elling, L.; Křen, V.; Enzymatic preparation of silybin phase II metabolites: sulfation using aryl sulfotransferase from rat liver. Applied Microbiology and Biotechnology, 2013, Roč. 97, č. 24, s.10391-10398. DOI: 10.1007/s00253-013-4794-0
Li, P.; Hulák, M.; Li, Z.; Šulc, M.; Pšenička, M.; Rodina, M.; Gela, D.; Linhart, O.; Cryopreservation of common carp (Cyprinus carpio L.) sperm induces protein phosphorylation in tyrosine and threonine residues. Theriogenology, 2013, Roč. 80, č. 2, s.84-89. DOI: 10.1016/j.theriogenology.2013.03.021
Wald, T.; Osičková, A.; Šulc, M.; Benada, O.; Semerádtová, A.; Řežábková, L.; Veverka, V.; Bednárová, L.; Malý, J.; Macek, P.; Šebo, P.; Slabý, I.; Vondrášek, J.; Osička, R.; Intrinsically disordered enamel matrix protein ameloblastin forms ribbon-like supramolecular structures via an N-terminal segment encoded by exon 5. Journal of Biological Chemistry, 2013, Roč. 288, č. 31, s.22333-22345. DOI: 10.1074/jbc.M113.456012
Zigo, M.; Jonáková, V.; Šulc, M.; Maňásková-Postlerová, P.; Characterization of sperm surface protein patterns of ejaculated and capacitated boar sperm, with the detection of ZP binding candidates. International Journal of Biological Macromolecules, 2013, Roč. 61, č. October 2013, s.322-328. DOI: 10.1016/j.ijbiomac.2013.07.014
Kubrycht, J.; Sigler, K.; Souček, P.; Hudeček, J.; Structures composing protein domains. Biochimie, 2013, Roč. 95, č. 8, s.1511-1524. DOI: 10.1016/j.biochi.2013.04.001
Marušincová, H.; Husárová, L.; Růžička, J.; Ingr, M.; Navrátil, V.; Buňková, L.; Koutny, M.; Polyvinyl alcohol biodegradation under denitrifying conditions. International Biodeterioration and Biodegradation, 2013, Roč. 84, č. October 2013, s.21-28. DOI: 10.1016/j.ibiod.2013.05.023
Navrátil, V.; Klusák, V.; Rulíšek, L.; Theoretical Aspects of Hydrolysis of Peptide Bonds by Zinc Metalloenzymes. Chemistry - A European Journal, 2013, Roč. 19, č. 49, s.16634-16645. DOI: 10.1002/chem.201302663
Kavan, D.; Kuzma, M.; Lemr, K.; Schug, K.; Havlíček, V.; CYCLONE-A Utility for De Novo Sequencing of Microbial Cyclic Peptides. Journal of the American Society for Mass Spectrometry, 2013, Roč. 24, č. 8, s.1177-1184. DOI: 10.1007/s13361-013-0652-7
Du, Y.; Liu, G.; Yan, Y.; Huang, D.; Luo, W.; Martínková, M.; Man, P.; Shimizu, T.; Conversion of a heme-based oxygen sensor to a heme oxygenase by hydrogen sulfide: effects of mutations in the heme distal side of a heme-based oxygen sensor phosphodiesterase (Ec DOS). Biometals, 2013, Roč. 26, č. 5, s.839-852. DOI: 10.1007/s10534-013-9640-4
Hernychová, L.; Man, P.; Verma, C.; Nicholson, J.; Sharma, C.; Růčková, E.; Teo, J.; Ball, K.; Vojtěšek, B.; Hupp, T.; Identification of a second Nutlin-3 responsive interaction site in the N-terminal domain of MDM2 using hydrogen/deuterium exchange mass spectrometry. Proteomics, 2013, Roč. 13, č. 16, s.2512-2525. DOI: 10.1002/pmic.201300029
Martínková, M.; Kitanishi, K.; Shimizu, T.; Heme-based globin-coupled oxygen sensors: linking oxygen binding to functional regulation of diguanylate cyclase, histidine kinase, and methyl-accepting chemotaxis. Journal of Biological Chemistry, 2013, Roč. 288, č. 39, s.27702-27711. DOI: 10.1074/jbc.R113.473249
Grobárová, V.; Benson, V.; Rozbeský, D.; Novák, P.; Černý, J.; Re-evaluation of the involvement of NK cells and C-type lectin-like NK receptors in modulation of immune responses by multivalent GlcNAc-terminated oligosaccharides. Immunology Letters, 2013, Roč. 156, č. 1-2, s.110-117. DOI: 10.1016/j.imlet.2013.09.009
Kishko, I.; Carey, J.; Řeha, D.; Brynda, J.; Winkler, R.; Harish, B.; Guerra, R.; Ettrichová, O.; Kukačka, Z.; Sheryemyetyeva, O.; Novák, P.; Kutý, M.; Kutá-Smatanová, I.; Ettrich, R.; Lapkouski, M.; 1.2 angstrom resolution crystal structure of Escherichia coli WrbA holoprotein. Acta Crystallographica Section D: Biological Crystallography, 2013, Roč. 69, č. 9, s.1748-1757. DOI: 10.1107/S0907444913017162
Grulich, M.; Štěpánek, V.; Kyslík, P.; Perspectives and industrial potential of PGA selectivity and promiscuity. Biotechnology Advances, 2013, Roč. 31, č. 8, s.1458-1472. DOI: 10.1016/j.biotechadv.2013.07.005
Kučera, T.; Otyepka, M.; Matušková, A.; Samad, A.; Kutejová, E.; Janata, J.; A Computational Study of the Glycine-Rich Loop of Mitochondrial Processing Peptidase. PLoS ONE, 2013, Roč. 8, č. 9, s.nestránkováno. DOI: 10.1371/journal.pone.0074518
Kaplan, O.; Veselá, A.; Petříčková, A.; Pasquarelli, F.; Pičmanová, M.; Rinágelová, A.; Bhalla, T.; Pátek, M.; Martínková, L.; A Comparative Study of Nitrilases Identified by Genome Mining. Applied Biochemistry and Biotechnology - Part B Molecular Biotechnology, 2013, Roč. 54, č. 3, s.996-1003. DOI: 10.1007/s12033-013-9656-6
Veselá, A.; Petříčková, A.; Weyrauch, P.; Martínková, L.; Heterologous expression, purification and characterization of arylacetonitrilases from Nectria haematococca and Arthroderma benhamiae. Biocatalysis and Biotransformation, 2013, Roč. 31, č. 1, s.49-56. DOI: 10.3109/10242422.2012.758117
Marhol, P.; Hartog, A.; van der Horst, M.; Wever, R.; Purchartová, K.; Fuksová, K.; Kuzma, M.; Cvačka, J.; Křen, V.; Preparation of silybin and isosilybin sulfates by sulfotransferase from Desulfitobacterium hafniense. Journal of Molecular Catalysis - B Enzymatic, 2013, Roč. 89, č. May (2013), s.24-27. DOI: 10.1016/j.molcatb.2012.12.005
Wu, Y.; Štefl, M.; Olžyńska, A.; Hof, M.; Yahioglu, G.; Yip, P.; Casey, D.; Ces, O.; Humpolíčková, J.; Kuimova, M.; Molecular rheometry: direct determination of viscosity in L-o and L-d lipid phases via fluorescence lifetime imaging. Physical Chemistry Chemical Physics, 2013, Roč. 15, č. 36, s.14986-14993. DOI: 10.1039/c3cp51953h
Konvalinka, J.; Kräusslich, H.; Rawlings, ND.; Salvesen, G.; Simian Immunodeficiency Virus Retropepsin. Handbook of Proteolytic Enzymes, 2013, s.204-207. DOI: 10.1016/B978-0-12-382219-2.00046-6
Konvalinka, J.; Kraeusslich, H.; Rawlings, ND.; Salvesen, G.; Miscellaneous Viral Retropepsins. Handbook of Proteolytic Enzymes, 2013, s.237-240. DOI: 10.1016/B978-0-12-382219-2.00056-9
Konvalinka, J.; Kräusslich, H.; Rawlings, ND.; Salvesen, G.; Spumapepsins. Handbook of Proteolytic Enzymes, 2013, , , s.245-248. DOI: 10.1016/B978-0-12-382219-2.00058-2
Křížek, T.; Doubnerová, V.; Ryšlavá, H.; Coufal, P.; Bosáková, Z.; Offline and online capillary electrophoresis enzyme assays of beta-N-acetylhexosaminidase. Analytical and Bioanalytical Chemistry, 2013, Roč. 405, č. 8, s.2425-2434. DOI: 10.1007/s00216-012-6607-1
Macáková, E.; Kopecká, M.; Kukačka, Z.; Veisová, D.; Novák, P.; Man, P.; Obšil, T.; Obšilová, V.; Structural basis of the 14-3-3 protein-dependent activation of yeast neutral trehalase Nth1. Biochimica et Biophysica Acta - General Subjects, 2013, Roč. 1830, č. 10, s.4491-4499. DOI: 10.1016/j.bbagen.2013.05.025
Čujová, S.; Slaninova, J.; Monincová, L.; Fucik, V.; Bednarova, L.; Stokrova, J.; Hovorka, O.; Voburka, Z.; Straka, J.; Cerovsky, V.; Panurgines, novel antimicrobial peptides from the venom of communal bee Panurgus calcaratus (Hymenoptera: Andrenidae). Amino Acids, 2013, Roč. 45, č. 1, s.143-157. DOI: 10.1007/s00726-013-1482-4
Přikryl, P.; Tichá, M.; Kučerová, Z.; Immobilized endoproteinase Glu-C to magnetic bead cellulose as a tool in proteomic analysis. Journal of Separation Science, 2013, Roč. 36, č. 12, s.2043-2048. DOI: 10.1002/jssc.201300118
Dušátková, L.; Zamrazilova, H.; Sedláčková, B.; Vcelak, J.; Hlavaty, P.; Hainerova, I.; Korenkova, V.; Bradnová, O.; Bendlova, B.; Kunesova, M.; Hainer, V.; Association of Obesity Susceptibility Gene Variants with Metabolic Syndrome and Related Traits in 1,443 Czech Adolescents. Folia Biologica, 2013, Roč. 59, č. 3, s.123-133.

2012

Stiborová, M.; Levová, K.; Bárta, F.; Shi, Z.; Frei, E.; Schmeiser, H.; Nebert, H.; Phillips, D.; Arlt,V.; Bioactivation versus Detoxication of the Urothelial Carcinogen Aristolochic Acid I by Human Cytochrome P450 1A1 and 1A2 Toxicological Sciences, 2012, 125(2), IF 4.652, s.345-358, DOI: 10.1093/toxsci/kfr306
Levová, K.; Moserová, M.; Nebert, DW.; Phillips, DH.; Frei, E.; Schmeiser, HH.; Arlt, VM.; Stiborová, M.; NAD(P)H:quinone oxidoreductase expression in Cyp1a-knockout and CYP1A-humanized mouse lines and its effect on bioactivation of the carcinogen aristolochic acid I Toxicology and Applied Pharmacology, 2012, 265(3), IF 4.447, s.360-367, DOI: 10.1016/j.taap.2012.09.004
Hlouchová, K.; Navrátil, V.; Tykvart, Šácha, P.; Konvalinka, J.; GCPII Variants, Paralogs and Orthologs Current Medicinal Chemistry, 2012, 19(9), IF 4.859, s.1316-1322
Stiborová, Indra, Moserová, Černá, Rupertová, M.; Martínek, Eckschlager, Kizek, R.; Frei, Cytochrome b(5) Increases Cytochrome P450 3A4-Mediated Activation of Anticancer Drug Ellipticine to 13-Hydroxyellipticine Whose Covalent Binding to DNA Is Elevated by Sulfotransferases and N,O-Acetyltransferases Chemical Research in Toxicology, 2012, 25(5), IF 3.779, s.1075-1085, DOI: 10.1021/tx3000335
Mrázek, H.; Benada, O.; Man, P.; Vaněk, O.; Křen, V.; Bezouška, K.; Weignerová, L.; Facile production of Aspergillus niger a-N-acetylgalactosaminidase in yeast Protein Expression and Purification , 2012, 81(1), IF 1.587, s.106-114, DOI: 10.1016/j.pep.2011.09.009
Petříčková, A.; Veselá, A.; Kaplan, O.; Kubáč, D.; Uhnáková, B.; Malandra, A.; Felsberg, J.; Rinágelová, A.; Weyrauch, P.; Křen, V.; Bezouška, K.; Martínková, L.; Purification and characterization of heterologously expressed nitrilases from filamentous fungi Applied Microbiology and Biotechnology, 2012, 93(4), IF 3.425, s.1553-1561, DOI: 10.1007/s00253-011-3525-7
Rozbeský, D.; Man, P.; Kavan, D.; Chmelík, J.; Černý, J.; Bezouška, K.; Novák, P.; Chemical cross-linking and H/D exchange for fast refinement of protein crystal structure Analytical Chemistry, 2012, 84(2), IF 5.856, s.867-870, DOI: 10.1021/ac202818m
Veselý, F.; Zolotarevová, E.; Špundová, M.; Kaftan, F.; Šlouf, M.; Entlicher, G.; Simple colorimetric methods for determination of sub-milligram amounts of ultrahigh molecular weight polyethylene wear particles Acta Biomaterialia, 2012, 8(5), IF 4.865, s.1935-1938, DOI: 10.1016/j.actbio.2012.01.010
Veisová, D.; Macáková, E.; Řežábková, L.; Šulc, M.; Vácha, P.; Sychrová, H.; Obšil, T.; Obšilová, V.; Role of individual phosphorylation sites for the 14-3-3-protein-dependent activation of yeast neutral trehalase Nth1 Biochemical Journal, 2012, 443(Part 3), IF 4.897, s.663-670, DOI: 10.1042/BJ20111615
Holakovská, B.; Gryčová, L.; Jirků, M.; Šulc, M.; Bumba, L.; Teisinger, J.; Calmodulin and S100A1 Protein Interact with N Terminus of TRPM3 Channel Journal of Biological Chemistry, 2012, 287(20), IF 4.773, s.16645-16655, DOI: 10.1074/jbc.M112.350686
Tykvart, J.; Šácha, P.; Bařinka, C.; Knedlík, T.; Starková, J.; Lubkowski, JT.; Konvalinka, J.; Efficient and versatile one-step affinity purification of in vivo biotinylated proteins: Expression, characterization and structure analysis of recombinant human glutamate carboxypeptidase II Protein Expression and Purification, 2012, 82(1), IF 1.587, s.106-115, DOI: 10.1016/j.pep.2011.11.016
Procházka, P.; Libra, A.; Zemanová, Z.; Hřebačková, J.; Poljaková, J.; Hraběta, J.; Bunček, M.; Stiborová, M.; Eckschlager, T.; Mechanisms of ellipticine-mediated resistance in UKF-NB-4 neuroblastoma cells Cancer Science, 2012, 103(2), IF 3.325, s.334-341, DOI: 10.1111/j.1349-7006.2011.02137.x
Čeřovská, N.; Hoffmeisterová, H.; Moravec, T.; Plchová, H.; Folwarczna, J.; Synková, H.; Ryšlavá, H.; Ludvíková, V.; Šmahel, M.; Transient expression of Human papillomavirus type 16 L2 epitope fused to N- and C-terminus of coat protein of Potato virus X in plants Journal of Biosciences, 2012, 37(1), IF 1.648, s.125-133, DOI: 10.1007/s12038-011-9177-z
Hynek, D.; Krejčová, L.; Zítka, O.; Adam, V.; Trnková, L.; Sochor, J.; Stiborová, M.; Eckschlager, T.; Hubálek, J.; Kizek, R.; Electrochemical Study of Doxorubicin Interaction with Different Sequences of Single Stranded Oligonucleotides, Part I International Journal of Electrochemical Science, 2012, 7(1), IF 3.729, s.13-33
Haladová, K.; Mrázek, H.; Ječmen, T; Halada, P; Man, P; Novák, P; Chmelík, J; Obšil, T; Šulc, M; The combination of hydrogen/deuterium exchange or chemical cross-linking techniques with mass spectrometry: Mapping of human 14-3-3 zeta homodimer interface Journal of Structural Biology, 2012, 179(1), IF 3.406, s.10-17, DOI: 10.1016/j.jsb.2012.04.016
Gerstorferová, Fliedrová, Halada, P.; Marhol, Křen, V.; Weignerová, L.; Recombinant alpha-L-rhamnosidase from Aspergillus terreus in selective trimming of rutin Process Biochemistry, 2012, 47(5), IF 2.627, s.828-835, DOI: 10.1016/j.procbio.2012.02.014
Hoffmeisterová, H.; Moravec, T.; Plchová, H.; Folwarczna, Čeřovská, N.; The influence of the N- and C- terminal modifications of Potato virus X coat protein on virus properties Biologia Plantarum, 2012, 56(4), IF 1.974, s.775-779, DOI: 10.1007/s10535-012-0130-2
Cipro, Š.; Hřebačková, J.; Hraběta, J.; Poljaková, J.; Eckschlager, T.; Valproic acid overcomes hypoxia-induced resistance to apoptosis Oncology Reports, 2012, 27(4), IF 1.835, s.1219-1226, DOI: 10.3892/or.2011.1577
Folwarczna, Moravec, T.; Plchová, Hoffmeisterová, Čeřovská, Efficient expression of Human papillomavirus 16 E7 oncoprotein fused to C-terminus of Tobacco mosaic virus (TMV) coat protein using molecular chaperones in Escherichia coli Protein Expression and Purification, 2012, 85(1), IF 1.587, s.152-157, DOI: 10.1016/j.pep.2012.07.008
Křížková, S.; Ryvolová, M.; Hynek, Eckschlager, Hodek, Masařík, Adam, V.; Kizek, R.; Immunoextraction of zinc proteins from human plasma using chicken yolk antibodies immobilized onto paramagnetic particles and their electrophoretic analysis Electrophoresis, 2012, 33(12), IF 3.303, s.1824-1832, DOI: 10.1002/elps.201100638
Fliedrová, Gerstorferová, Křen, V.; Weignerová, Production of Aspergillus niger beta-mannosidase in Pichia pastoris Protein Expression and Purification, 2012, 85(2), IF 1.587, s.159-164, DOI: 10.1016/j.pep.2012.07.012
Křenek, Šimon, Weignerová, Fliedrová, Kuzma, Křen, V.; Facile synthesis of nitrophenyl 2-acetamido-2-deoxy-alpha-D-mannopyranosides from ManNAc-oxazoline Beilstein Journal of Organic Chemistry, 2012, 8(20.3.2012), IF 2.517, s.428-432, DOI: 10.3762/bjoc.8.48
Slámová, K.; Bojarová, Gerstorferová, Fliedrová, Hofmeisterová, Fiala, Pompach, Křen, V.; Sequencing, cloning and high-yield expression of a fungal beta-N-acetylhexosaminidase in Pichia pastoris Protein Expression and Purification, 2012, 82(1), IF 1.587, s.212-217, DOI: 10.1016/j.pep.2012.01.004
Klvaňa, M.; Murphy, DL.; Jeřábek, P.; Goodman, MF.; Warshel, A.; Sweasy, JB.; Florián, J.; Catalytic Effects of Mutations of Distant Protein Residues in Human DNA Polymerase beta: Theory and Experiment Biochemistry, 2012, 51(44), IF 3.422, s.8829-8843, DOI: 10.1021/bi300783t
Veselá, A.; Pelantová, H.; Šulc, M.; Macková, M.; Lovecká, P.; Thimová, M.; Pasquarelli, F.; Pičmanová, M.; Pátek, M.; Bhalla, TC.; Martínková, L.; Biotransformation of benzonitrile herbicides via the nitrile hydratase-amidase pathway in rhodococci Journal of Industrial Microbiology and Biotechnology, 2012, 39(12), IF 2.735, s.1811-1819, DOI: 10.1007/s10295-012-1184-z
Arlt, VM.; Poirier, MC.; Sykes, SE.; John, K.; Moserová, M.; Stiborová, M.; Wolf, CR.; Henderson, CJ.; Phillips, DH.; Exposure to benzo[a]pyrene of Hepatic Cytochrome P450 Reductase Null (HRN) and P450 Reductase Conditional Null (RCN) mice: Detection of benzo[a]pyrene diol epoxide-DNA adducts by immunohistochemistry and P-32-postlabelling Toxicology Letters, 2012, 213(2), IF 3.230, s.160-166, DOI: 10.1016/j.toxlet.2012.06.016
Naiman, K.; Dračínský, M.; Hodek, P.; Martínková, M.; Schmeiser, H.; Frei, E.; Stiborová, M.; Formation, Persistence, and Identification of DNA Adducts Formed by the Carcinogenic Environmental Pollutant o-Anisidine in Rats Toxicological Sciences, 2012, 127(2), IF 4.652, s.348-359, DOI: 10.1093/toxsci/kfs104
Kizek, R.; Adam, V.; Hraběta, J.; Eckschlager, T.; Smutný, S.; Burda, J.; Frei, E.; Stiborová, M.; Anthracyclines and ellipticines as DNA-damaging anticancer drugs: Recent advances Pharmacology and Therapeutics, 2012, 133(1), IF 8.562, s.26-39, DOI: 10.1016/j.pharmthera.2011.07.006
Hynek, Krejčová, Zítka, O.; Adam, V.; Trnková, L.; Sochor, J.; Stiborová, Eckschlager, Hubálek, J.; Kizek, R.; Electrochemical Study of Doxorubicin Interaction with Different Sequences of Double Stranded Oligonucleotides, Part II International Journal of Electrochemical Science, 2012, 7(1), IF 3.729, s.34-49
Hynek, Křížková, S.; Krejčová, Gumulec, J.; Ryvolová, M.; Cernei, NV.; Masařík, Adam, V.; Trnková, L.; Stiborová, Eckschlager, Hubálek, J.; Kizek, R.; Femtogram Electroanalytical Detection of Prostatic Specific Antigen by Brdicka Reaction International Journal of Electrochemical Science, 2012, 7(3), IF 3.729, s.1749-1766
Krejčová, Fabrik, Hynek, Křížková, S.; Gumulec, J.; Ryvolová, M.; Adam, V.; Babula, Trnková, L.; Stiborová, Hubálek, J.; Masařík, Binková, Eckschlager, Kizek, R.; Metallothionein Electrochemically Determined using Brdicka Reaction as a Promising Blood Marker of Head and Neck Malignant Tumours International Journal of Electrochemical Science, 2012, 7(3), IF 3.729, s.1767-1784
Sochor, J.; Hynek, Krejčová, Fabrik, Křížková, S.; Gumulec, J.; Adam, V.; Babula, Trnková, L.; Stiborová, Hubálek, J.; Masařík, Binková, Eckschlager, Kizek, R.; Study of Metallothionein Role in Spinocellular Carcinoma Tissues of Head and Neck Tumours using Brdicka Reaction International Journal of Electrochemical Science, 2012, 7(3), IF 3.729, s.2136-2152
Dospivová, Šmerková, K.; Ryvolová, M.; Hynek, Adam, V.; Kopel, Stiborová, Eckschlager, Hubálek, J.; Kizek, R.; Catalytic Electrochemical Analysis of Platinum in Pt-DNA Adducts International Journal of Electrochemical Science, 2012, 7(4), IF 3.729, s.3072-3088
Pohanka, Sochor, J.; Ruttkay-Nedecký, Cernei, Adam, V.; Hubálek, J.; Stiborová, Eckschlager, Kizek, R.; Automated assay of the potency of natural antioxidants using pipetting robot and spectrophotometry Journal of Applied Biomedicine, 2012, 10(3), IF 1.933, s.155-167, DOI: 10.2478/v10136-012-0006-y
Ryvolová, M.; Adam, V.; Eckschlager, Stiborová, Kizek, R.; Study of DNA-ellipticine interaction by capillary electrophoresis with laser-induced fluorescence detection Electrophoresis, 2012, 33(11), IF 3.303, s.1545-1549, DOI: 10.1002/elps.201200056
Stiborová, Poljaková, Eckschlager, Kizek, R.; Frei, Analysis of covalent ellipticine- and doxorubicin-derived adducts in DNA of neuroblastoma cells by the P-32-postlabeling technique Biomedical papers of the Medical Faculty of the University Palacky, Olomouc, CzechoSK, 2012, 156(2), IF 0.702, s.115-121, DOI: 10.5507/bp.2012.043
Babula, Masařík, Adam, V.; Eckschlager, Stiborová, Trnková, L.; Škutková, Provazník, Hubálek, J.; Kizek, Mammalian metallothioneins: properties and functions Metallomics, 2012, 4(8), IF 3.902, s.739-750, DOI: 10.1039/c2mt20081c
Khalil, Hraběta, Cipro, Stiborová, Vícha, Eckschlager, Neuroblastoma stem cells - mechanisms of chemoresistance and histonedeacetylase inhibitors Neoplasma, 2012, 59(6), IF 1.440, s.737-746, DOI: 10.4149/neo_2012_093
Blažková, I.; Dostálová, S.; Šmerková, K.; Ryvolová, M.; Adam, V.; Eckschlager, T.; Stiborová, M.; Kizek, R.; Protinádorové léčivo doxorubicin a jeho in vivo analýza fluorescenční mikroskopií CHEMagazín, 2012, XXII(2012)(5), s.8-10
Stiborová, Eckschlager, Poljaková, Hraběta, Adam, V.; Kizek, R.; Frei, E.; The Synergistic Effects of DNA-Targeted Chemotherapeutics and Histone Deacetylase Inhibitors As Therapeutic Strategies for Cancer Treatment Current Medicinal Chemistry, 2012, 19(25), IF 4.859, s.4218-4238
Stiborová, M.; Poljaková, J.; Martínková, E.; Ulrichová, J.; Šimánek, V.; Dvořák, Z.; Frei, E.; Ellipticine oxidation and DNA adduct formation in human hepatocytes is catalyzed by human cytochromes P450 and enhanced by cytochrome b5 Toxicology, 2012, 302(2-3), IF 3.681, s.233-241, DOI: 10.1016/j.tox.2012.08.004
Zítka, O.; Komínková, M.; Skaličková, S.; Škutková, H.; Provazník, I.; Eckschlager, T.; Stiborová, M.; Adam, V.; Trnková, L.; Kizek, R.; Hydrodynamic Voltammograms Profiling of Metallothionein Fragment International Journal of Electrochemical Science, 2012, 7(11), IF 3.729, s.10544-10561
Křížková, S.; Ryvolová, M.; Hraběta, J.; Adam, V.; Stiborová, M.; Eckschlager, T.; Kizek, R.; Metallothioneins and zinc in cancer diagnosis and therapy Drug Metabolism Reviews, 2012, 44(4), IF 6.400, s.287-301, DOI: 10.3109/03602532.2012.725414
Přikryl, Lenfeld, J.; Horák, Tichá, Kučerová, Magnetic Bead Cellulose as a Suitable Support for Immobilization of alpha-Chymotrypsin Applied Biochemistry and Biotechnology - Part A Enzyme Engineering and Biotechnology, 2012, 168(2), IF 1.943, s.295-305, DOI: 10.1007/s12010-012-9772-y
Rajčanová, Tichá, Kučerová, Application of heptapeptides containing D-amino acid residues immobilized to magnetic particles and Sepharose for the study of binding properties of gastric aspartic proteases Journal of Separation Science, 2012, 35(15), IF 2.733, s.1899-1905, DOI: 10.1002/jssc.201200221
Schimer, J.; Cígler, P; Veselý, J; Šašková, K.; Lepšík, M; Brynda, J.; Řezáčová, P.; Kožíšek, M; Císařová, Oberwinkler, H.; Kraeusslich, H.; Konvalinka, J.; Structure-Aided Design of Novel Inhibitors of HIV Protease Based on a Benzodiazepine Scaffold Journal of Medicinal Chemistry, 2012, 55(22), IF 5.248, s.10130-10135, DOI: 10.1021/jm301249q
Grave, Tůmová, Mrázek, Kavan, Chmelík, Vaněk, Novák, Bezouška, Preparation of soluble isotopically labeled NKp30, a human natural cytotoxicity receptor, for structural studies using NMR Protein Expression and Purification, 2012, 86(2), IF 1.587, s.142-150, DOI: 10.1016/j.pep.2012.09.016
Skálová, Kotýnková, Dušková, Hašek, J.; Koval, T.; Kolenko, Novák, Man, Hanč, P.; Vaněk, Bezouška, Dohnálek, Mouse Clr-g, a Ligand for NK Cell Activation Receptor NKR-P1F: Crystal Structure and Biophysical Properties Journal of Immunology, 2012, 189(10), IF 5.788, s.4881-4889, DOI: 10.4049/jimmunol.1200880
Bezouška, Kubínková, Stříbný, Volfová, Pompach, Kuzma, Šírová, Říhová, Dimerization of an Immunoactivating Peptide Derived from Mycobacterial hsp65 Using N-Hydroxysuccinimide Based Bifunctional Reagents Is Critical for Its Antitumor Properties Bioconjugate Chemistry, 2012, 23(10), IF 4.930, s.2032-2041, DOI: 10.1021/bc300056x
Krásný, L.; Pompach, Strohalm, Obšilová, Strnadová, Novák, Volný, In-situ enrichment of phosphopeptides on MALDI plates modified by ambient ion landing Journal of Mass Spectrometry, 2012, 47(10), IF 3.268, s.1294-1302, DOI: 10.1002/jms.3081
Hrouzek, Kuzma, Černý, Novák, Fišer, Šimek, Lukešová, Kopecký, J.; The Cyanobacterial Cyclic Lipopeptides Puwainaphycins F/G Are Inducing Necrosis via Cell Membrane Permeabilization and Subsequent Unusual Actin Relocalization Chemical Research in Toxicology, 2012, 25(6), IF 3.779, s.1203-1211, DOI: 10.1021/tx300044t
Doubnerová, V.; Utilization of Enzymes in Biochemistry and Analytical Biochemistry Biochemistry & Analytical Biochemistry, 2012, 1(4), s.nestránkováno, DOI: 10.4172/2161-1009.1000e110
Ryvolová, M.; Chomoucká, Drbohlavová, Kopel, Babula, Hynek, Adam, V.; Eckschlager, Hubálek, J.; Stiborová, Kaiser, Kizek, R.; Modern Micro and Nanoparticle-Based Imaging Techniques Sensors, 2012, 12(11), IF 1.739, s.14792-14820, DOI: 10.3390/s121114792
Líbalová, H.; Uhlířov, K.; Kléma, J.; Machala, M.; Šrám, R.; Ciganek, M.; Topinka, J.; Global gene expression changes in human embryonic lung fibroblasts induced by organic extracts from respirable air particles Particle and Fibre Toxicology, 2012, 9(1), IF 7.253, 1-16, DOI: 10.1186/1743-8977-9-1
Škutková, H.; Babula, P.; Stiborová, M.; Eckschlager, T.; Trnková, L.; Provazník, I.; Hubálek, J.; Kizek, R.; Adam, V.; Structure, Polymorphisms and Electrochemistry of Mammalian Metallothioneins - A Review International Journal of Electrochemical Science, 2012, 7(12), IF 3.729, s.12415-12431
Stiborová, M.; Čechová, T.; Bořek Dohalská, L.; Moserová, M.; Frei, E.; Schmeiser, HH.; Páca, J.; Arlt, VM.; Activation and detoxification metabolism of urban air pollutants 2-nitrobenzanthrone and carcinogenic 3-nitrobenzanthrone by rat and mouse hepatic microsomes Neuroendocrinology Letters, 2012, 33(Suppl 3), IF 1.296, s.8-15
Groh, T.; Hraběta, J.; Poljaková, J.; Eckschlager, T.; Stiborová, M.; Impact of histone deacetylase inhibitor valproic acid on the anticancer effect of etoposide on neuroblastoma cells Neuroendocrinology Letters, 2012, 33(Suppl 3), IF 1.296, s.16-24
Jeřábek, P.; Martínek, V.; Stiborová, M.; Theoretical investigation of differences in nitroreduction of aristolochic acid I by cytochromes P450 1A1, 1A2 and 1B1 Neuroendocrinology Letters, 2012, 33(Suppl 3), IF 1.296, s.25-32
Martínková, M.; Kubíčková, B.; Stiborová, M.; Effects of cytochrome P450 inhibitors on peroxidase activity Neuroendocrinology Letters, 2012, 33(Suppl 3), IF 1.296, s.33-40
Šulc, M.; Ječmen, T.; Šnajdrová, R.; Novák, P.; Martínek, V.; Hodek, P.; Stiborová, M.; Hudeček, J.; Mapping of interaction between cytochrome P450 2B4 and cytochrome b5: the first evidence of two mutual orientations Neuroendocrinology Letters, 2012, 33(Suppl 3), IF 1.296, s.41-47

2011

Sovová, Ž.; Kopecký, V.; Pazderka, T.; Hofbauerová, K.; Rozbeský, D.; Vaněk, O.; Bezouška, K.; Ettrich, R.; Structural analysis of natural killer cell receptor protein 1 (NKR-P1) extracellular domains suggests a conserved long loop region involved in ligand specificity Journal of Molecular Modeling, 2011, 17(6), IF 1.871, s.1353-1370, DOI: 10.1007/s00894-010-0837-y
Kaplan, O.; Bezouška, K.; Malandra, A.; Veselá, AB.; Petříčková, A.; Felsberg, J.; Rinágelová, A.; Křen, V.; Martínková, L.; Genome mining for the discovery of new nitrilases in filamentous fungi Biotechnology Letters, 2011, 33(2), IF 1.768, s.309-312, DOI: 10.1007/s10529-010-0421-7
Šulc, M.; Fadrhonsová, I.; Jelínková, M.; Chudomelová, M.; Felsberg, J.; Olšovská, J.; Determination of sibiromycin and its natural derivatives using new analytical and structural approaches Journal of Chromatography A, 2011, 1218(1), IF 4.194, s.83-91, DOI: 10.1016/j.chroma.2010.10.110
Ryšlavá, H.; Kalendová, A.; Doubnerová, V.; Skočdopol, P.; Kumar, V.; Kukačka, Z.; Pompach, P.; Vaněk, O.; Slámová, K.; Bojarová, P.; Kulik, N.; Ettrich, R.; Křen, V.; Bezouška, K.; Enzymatic characterization and molecular modeling of an evolutionarily interesting fungal beta-N-acetylhexosaminidase FEBS Journal, 2011, 278(14), IF 3.129, s.2469-2484, DOI: 10.1111/j.1742-4658.2011.08173.x
Maňásková-Postlerová, P.; Davidová, N.; Šulc, M.; Philimonenko, A.; Hozák, P.; Jonáková, V.; Reproductive tissue expression and sperm localization of porcine beta-microseminoprotein Cell and Tissue Research, 2011, 344(2), IF 2.804, s.341-353, DOI: 10.1007/s00441-011-1149-y
Kučerová, Z.; Muselová, H.; Přikryl, P.; Tichá, M.; Phosphoprotein electrophoresis in the presence of Fe(III) ions Journal of Separation Science, 2011, 34(15), IF 2.631, s.1875-1879, DOI: 10.1002/jssc.201100321
Dráb, T.; Kračmerová, J.; Tichá, I.; Hanzlíková, E.; Tichá, M.; Liberda, J.; Native polyacrylamide electrophoresis in the presence of Ponceau Red to study oligomeric states of protein complexes. Journal of Separation Science, 2011, 34(14), IF 2.631, s.1692-1695, DOI: 10.1002/jssc.201000869
Dráb, T.; Kračmerová, J.; Tichá, I.; Hanzlíková, E.; Tichá, M.; Ryšlavá, H.; Doubnerová, V.; Maňásková-Postlerová, P.; Liberda, J.; Native Red Electrophoresis - A new method suitable for separation of native proteins Electrophoresis, 2011, 32(24), IF 3.569, s.3597-3599, DOI: 10.1002/elps.201100310
Doubnerová, V.; Ryšlavá, H.; What can enzymes of C-4 photosynthesis do for C-3 plants under stress? Plant Science, 2011, 180(4), IF 2.481, s.575-583, DOI: 10.1016/j.plantsci.2010.12.005
Plechanovová, A.; Byun, Y.; Alquicer, G.; Skultetyova, L.; Mlčochová, P.; Němcová, A.; Kim, H.; Navrátil, M.; Mease, R.; Lubkowski, J.; Pomper, M.; Konvalinka, J.; Rulíšek, L.; Bařinka, C.; Novel Substrate-Based Inhibitors of Human Glutamate Carboxypeptidase II with Enhanced Lipophilicity Journal of Medicinal Chemistry, 2011, 54(21), IF 5.207, s.7535-7546, DOI: 10.1021/jm200807m
Hodek, P.; Křížková, J.; Frei, E.; Singh, R.; Arlt, VM.; Stiborová, M.; Impact of beta-naphthoflavone on genotoxicity of food-derived carcinogens Neuroendocrinology Letters, 2011, 32(1), IF 1.621, s.25-34
Stiborová, M.; Mareš, J.; Levová, K.; Pavlíčková, J.; Bárta, F.; Hodek, P.; Frei, E.; Schmeiser, HH.; Role of cytochromes P450 in metabolism of carcinogenic aristolochic acid I: evidence of their contribution to aristolochic acid I detoxication and activation in rat liver. Neuroendocrinology Letters, 2011, 32(1), IF 1.621, s.121-130
Kavan, D.; Man, P.; MSTools-Web based application for visualization and presentation of HXMS data International Journal of Mass Spectrometry, 2011, 302(1-3), IF 2.009, s.53-58, DOI: 10.1016/j.ijms.2010.07.030
Horn, M.; Jílková, A.; Vondrášek, J.; Marešová, L.; Caffrey, CR.; Mareš, M.; Mapping the Pro-Peptide of the Schistosoma mansoni Cathepsin B1 Drug Target: Modulation of Inhibition by Heparin and Design of Mimetic Inhibitors ACS chemical biology, 2011, 6(6), IF 5.698, s.609-617, DOI: 10.1021/cb100411v
Slaninová, J.; Putnová, H.; Borovičková, L.; Šácha, P.; Čeřovský, V.; Monincová, L.; Fučík, V.; The antifungal effect of peptides from hymenoptera venom and their analogs Central European Journal of Biology, 2011, 6(2), IF 0.685, s.150-159, DOI: 10.2478/s11535-010-0111-4
Kotrbová, V.; Mrázová, B.; Moserová, M.; Martínek, V.; Hodek, P.; Hudeček, J.; Frei, E.; Stiborová, M.; Cytochrome b(5) shifts oxidation of the anticancer drug ellipticine by cytochromes P450 1A1 and 1A2 from its detoxication to activation, thereby modulating its pharmacological efficacy Biochemical Pharmacology, 2011, 82(6), IF 4.889, s.669-680, DOI: 10.1016/j.bcp.2011.06.003
Stiborová, M.; Mareš, J.; Frei, E.; Arlt, VM.; Martínek, V.; Schmeiser, HH.; The Human Carcinogen Aristolochic Acid I Is Activated to Form DNA Adducts by Human NAD(P)H:quinone Oxidoreductase Without the Contribution of Acetyltransferases or Sulfotransferases Environmental and Molecular Mutagenesis, 2011, 52(6), IF 3.493, s.448-459, DOI: 10.1002/em.20642
Kaplan, O.; Bezouška, K.; Plíhal, O.; Ettrich, R.; Kulik, N.; Vaněk, O.; Kavan, D.; Benada, O.; Malandra, A.; Šveda, O.; Veselá, A.; Rinágelová, A.; Slámová, K.; Cantarella, M.; Felsberg, J.; Dušková, J.; Dohnálek, J.; Kotík, M.; Křen, V.; Martínková, L.; Heterologous expression, purification and characterization of nitrilase from Aspergillus niger K10 BMC Biotechnology, 2011, 11(2), IF 2.859, s.nestránkováno, DOI: 10.1186/1472-6750-11-2
Rozbeský, D.; Kavan, D.; Chmelík, J.; Novák, P.; Vaněk, O.; Bezouška, K.; High-level expression of soluble form of mouse natural killer cell receptor NKR-P1C(B6) in Escherichia coli Protein Expression and Purification, 2011, 77(2), IF 1.644, s.178-184, DOI: 10.1016/j.pep.2011.01.013
Vaněk, O.; Brynda, J.; Hofbauerová, K.; Kukačka, Z.; Pachl, P.; Bezouška, K.; Řezáčová, P.; Crystallization and diffraction analysis of .beta.-N-acetylhexosaminidase from Aspergillus oryzae Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2011, 67, IF 0.563, s.498-503, DOI: 10.1107/S1744309111004945
Drozdová, A.; Bojarová, P.; Křenek, K.; Weignerová, L.; Henßen, B.; Elling, L.; Christensen, H.; Jensen, HH.; Pelantová, H.; Kuzma, M.; Bezouška, K.; Krupová, M.; Adámek, D.; Slámová, K.; Křen, V.; Enzymatic synthesis of dimeric glycomimetic ligands of NK cell activation receptors Carbohydrate Research, 2011, 346(12), IF 1.898, s.1599-1609, DOI: 10.1016/j.carres.2011.04.043
Bojarová, P.; Slámová, K.; Křenek, K.; Gažák, R.; Kulik, N.; Ettrich, R.; Pelantová, H.; Kuzma, M.; Riva, S.; Adámek, D.; Bezouška, K.; Křen, V.; Charged Hexosaminides as New Substrates for .beta.-N-Acetylhexosaminidase-Catalyzed Synthesis of Immunomodulatory Disaccharides Advanced Synthesis and Catalysis, 2011, 353(13), IF 5.250, s.2409-2420, DOI: 10.1002/adsc.201100371
Pechar, M.; Pola, R.; Laga, R.; Ulbrich, K.; Bednárová, L.; Maloň, P.; Sieglová, I.; Král, V.; Fábry, M.; Vaněk, O.; Coiled Coil Peptides as Universal Linkers for the Attachment of Recombinant Proteins to Polymer Therapeutics Biomacromolecules, 2011, 12(10), IF 5.325, s.3645-3655, DOI: 10.1021/bm200897b
Levová, K.; Moserová, M.; Kotrbová, V.; Šulc, M.; Henderson, CJ.; Wolf, CR.; Phillips, DH.; Frei, E.; Schmeiser, HH.; Mareš, J.; Arlt,, VM.; Stiborová, M.; Role of Cytochromes P450 1A1/2 in Detoxication and Activation of Carcinogenic Aristolochic Acid I: Studies with the Hepatic NADPH:Cytochrome P450 Reductase Null (HRN) Mouse Model Toxicological Sciences, 2011, 121(1), IF 5.093, s.43-56, DOI: 10.1093/toxsci/kfr050
Hudcová, T.; Halecký, M.; Kozliak, E.; Stiborová, M.; Páca, J.; Aerobic degradation of 2,4-dinitrotoluene by individual bacterial strains and defined mixed population in submerged cultures Journal of Hazardous Materials, 2011, 192(2), IF 3.723, s.605-613, DOI: 10.1016/j.jhazmat.2011.05.061
Arlt, VM.; Levová, K.; Bárta, F.; Shi, ZQ.; Evans, JD.; Frei, E.; Schmeiser, HH.; Nebert, DW.; Phillips, DH.; Stiborová, M.; Role of P450 1A1 and P450 1A2 in Bioactivation versus Detoxication of the Renal Carcinogen Aristolochic Acid I: Studies in Cyp1a1(-/-), Cyp1a2(-/-), and Cyp1a1/1a2(-/-) Mice Chemical Research in Toxicology, 2011, 24(10), IF 4.148, s.1710-1719, DOI: 10.1021/tx200259y
Mizerovská, J.; Dračínská, H.; Frei, E.; Schmeiser, HH.; Arlt, VM.; Stiborová, M.; Induction of biotransformation enzymes by the carcinogenic air-pollutant 3-nitrobenzanthrone in liver, kidney and lung, after intra-tracheal instillation in rats Mutation Research - Genetic Toxicology and Environmental Mutagenesis, 2011, 720(1-2), IF 2.938, s.34-41, DOI: 10.1016/j.mrgentox.2010.12.003
Hendrychová, T.; Anzenbacherová, E.; Hudeček, J.; Skopalík, J.; Lange, R.; Hildebrandt, P.; Otyepka, M.; Anzenbacher, P.; Flexibility of human cytochrome P450 enzymes: Molecular dynamics and spectroscopy reveal important function-related variations Biochimica et Biophysica Acta - Proteins and Proteomics, 2011, 1(11), IF 2.773, s.58-68, DOI: 10.1016/j.bbapap.2010.07.017
Kosina, P.; Vacek, J.; Papoušková, B.; Stiborová, M.; Stýskala, J.; Cankař, P.; Vrublová, E.; Vostálová, J.; Šimánek, V.; Ulrichová, J.; Identification of benzo[c]phenanthridine metabolites in human hepatocytes by liquid chromatography with electrospray ion-trap and quadrupole time-of-flight mass spectrometry Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 2011, 879(15-16), IF 2.971, s.1077-1085, DOI: 10.1016/j.jchromb.2011.03.023
Stiborová, M.; Rupertová, M.; Frei, E.; Cytochrome P450-and peroxidase-mediated oxidation of anticancer alkaloid ellipticine dictates its anti-tumor efficiency Biochimica et Biophysica Acta - Proteins and Proteomics, 2011, 1814(1), IF 2.773, s.175-185, DOI: 10.1016/j.bbapap.2010.05.016
Kolenko, P.; Rozbeský, D.; Vaněk, O.; Kopecký, V.; Hofbauerová, K.; Novák, P.; Pompach, P.; Hašek, J.; Skálová, T.; Bezouška, K.; Dohnálek, J.; Molecular architecture of mouse activating NKR-P1 receptors Journal of Structural Biology, 2011, 175(3), IF 3.497, s.434-441, DOI: 10.1016/j.jsb.2011.05.001
Kolenko, P.; Rozbeský, D.; Vaněk, O.; Bezouška, K.; Hašek, J.; Dohnálek, J.; Structure of the H107R variant of the extracellular domain of mouse NKR-P1A at 2.3Ao resolution Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2011, 67, IF 0.563, s.1519-1523, DOI: 10.1107/S1744309111046203
Jirásková-Vaníčková, J.; Ettrich, R.; Vorlová, B.; Hoffman, H.; Lepšík, M.; Jansa, P.; Konvalinka, J.; Inhibition of Human Serine Racemase, an Emerging Target for Medicinal Chemistry Current Drug Targets, 2011, 12(7), IF 3.061, s.1037-1055
Grulich, M.; Maršálek, J.; Kyslík, P.; Štěpánek, V.; Kotík, M.; Production, enrichment and immobilization of a metagenome-derived epoxide hydrolase Process Biochemistry, 2011, 46(2), IF 2.648, s.526-532, DOI: 10.1016/j.procbio.2010.10.004
Purchartová, K.; Marhol, P.; Gažák, R.; Monti, D.; Riva, S.; Kuzma, M.; Křen, V.; Regioselective alcoholysis of silybin A and B acetates with lipases Journal of Molecular Catalysis - B Enzymatic, 2011, 71(3-4), IF 2.330, s.119-123, DOI: 10.1016/j.molcatb.2011.04.007
Stiborová, M.; Poljaková, J.; Martínková, E.; Bořek Dohalská, L.; Eckschlager, T.; Kizek, R.; Frei, E.; Ellipticine cytotoxicity to cancer cell lines - a comparative study Interdisciplinary toxicology, 2011, 4(2), s.98-105, DOI: 10.2478/v10102-011-0017-7
Křížková, S.; Zítka, O.; Masařík, M.; Adam, V.; Stiborová, M.; Eckschlager, T.; Hubálek, J.; Kizek, R.; Clinical importance of matrix metalloproteinases Bratislavske Lekarske Listy, 2011, 112(8), IF 0.345, s.435-440
Páca, J.; Halecký, M.; Hudcová, T.; Páca, J.; Stiborová, M.; Kozliak, E.; Factors influencing the aerobic biodegradation of 2,4-dinitrotoluene in continuous packed bed reactors. Journal of Environmental Science and Health - Part A Toxic/Hazardous Substances and Environmental Engineering, 2011, 46(12), IF 1.107, s.1328-1337, DOI: 10.1080/10934529.2011.606422
Zigo, M.; Jonáková, V.; Maňásková-Postlerová, P.; Electrophoretic and zymographic characterization of proteins isolated by various extraction methods from ejaculated and capacitated boar sperms Electrophoresis, 2011, 32(11), IF 3.569, s.1309-1318, DOI: 10.1002/elps.201000558
Maňásková-Postlerová, P.; Davidová, N.; Jonáková, V.; Biochemical and binding characteristics of boar epididymal fluid proteins Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 2011, 879(1), IF 2.971, s.100-106, DOI: 10.1016/j.jchromb.2010.11.023
Michalová, J.; Savvulidi, F.; Šefc, L.; Faltusová, K.; Forgáčová, K.; Nečas, E.; Hematopoietic Stem Cells Survive Circulation Arrest and Reconstitute Hematopoiesis in Myeloablated Mice Biology of Blood and Marrow Transplantation, 2011, 17(9), IF 3.275, s.1273-1281, DOI: 10.1016/j.bbmt.2011.07.007
Arlt, VM.; Singh, R.; Stiborová, M.; da Costa, GG.; Frei, E.; Evans, JD.; Farmer, PB.; Wolf, CR.; Henderson, CJ.; Phillips, DH.; Effect of Hepatic Cytochrome P450 (P450) Oxidoreductase Deficiency on 2-Amino-1-methyl-6-phenylimidazo[4,5-b]pyridine- DNA Adduct Formation in P450 Reductase Conditional Null Mice Drug Metabolism and Disposition, 2011, 39(12), IF 3.716, s.2169-2173, DOI: 10.1124/dmd.111.041343
Křížková, S.; Zítka, O.; Masařík, M.; Adam, V.; Stiborová, M.; Eckschlager, T.; Chavis, GJ.; Kizek, R.; Assays for determination of matrix metalloproteinases and their activity TrAC - Trends in Analytical Chemistry, 2011, 30(11), IF 6.602, s.1819-1832, DOI: 10.1016/j.trac.2011.06.016
Turek, M.; Vilímková, L.; Kremláčková, V.; Páca, J.; Halecký, M.; Páca, J.; Stiborová, M.; Isolation and partial characterization of extracellular NADPH-dependent phenol hydroxylase oxidizing phenol to catechol in Comamonas testosteroni Neuroendocrinology Letters, 2011, 32(1), IF 1.621, s.137-145
Naiman, K.; Martínková, M.; Schmeiser, HH.; Frei, E.; Stiborová, M.; Human cytochrome-P450 enzymes metabolize N-(2-methoxyphenyl)hydroxylamine, a metabolite of the carcinogens o-anisidine and o-nitroanisole, thereby dictating its genotoxicity Mutation Research - Genetic Toxicology and Environmental Mutagenesis, 2011, 726(2), IF 2.938, s.160-168, DOI: 10.1016/j.mrgentox.2011.09.010
Gumulec, J.; Masařík, M.; Křížková, S.; Adam, V.; Hubálek, J.; Hraběta, J.; Eckschlager, T.; Stiborová, M.; Kizek, R.; Insight to Physiology and Pathology of Zinc(II) Ions and Their Actions in Breast and Prostate Carcinoma Current Medicinal Chemistry, 2011, 18(33), IF 4.630, s.5041-5051, DOI: 10.2174/092986711797636126
Martínek, V.; Kubíčková, B.; Arlt, VM.; Frei, E.; Schmeiser, HH.; Hudeček, J.; Stiborová, M.; Comparison of activation of aristolochic acid I and II with NADPH:quinone oxidoreductase, sulphotransferases and N-acetyltranferases Neuroendocrinology Letters, 2011,32(1), IF 1.621, s.57-70
Poljaková, J.; Hřebačková, J.; Dvořáková, M.; Moserová, M.; Eckschlager, T.; Hraběta, J.; Göttlicherová, M.; Kopejtková, B.; Frei, E.; Kizek, R.; Stiborová, M.; Anticancer agent ellipticine combined with histone deacetylase inhibitors, valproic acid and trichostatin A, is an effective DNA damage strategy in human neuroblastoma Neuroendocrinology Letters, 2011, 32(1), IF 1.621, s.101-116

2010

Slámová, K.; Marhol, P.; Bezouška, K.; Lindkvist, L.; Hansen, SG.; Křen, V.; Jensen, HH.; Synthesis and biological activity of glycosyl-1H-1,2,3-triazoles Bioorganic and Medicinal Chemistry Letters, 2010, 20(14), IF 2.661, s.4263-4265, DOI: 10.1016/j.bmcl.2010.04.151
Catelani, G.; D’Andrea, F.; Griselli, A.; Guazzelli, L.; Němcová, P.; Bezouška, K.; Křenek, K.; Křen, V.; Deoxynojirimycin and its hexosaminyl derivatives bind to natural killer cell receptors rNKR-P1A and hCD69 Bioorganic and Medicinal Chemistry Letters, 2010, 20(15), IF 2.661, s.4645-4648, DOI: 10.1016/j.bmcl.2010.05.109
Bezouška, K.; Šnajdrová, R.; Křenek, K.; Vančurová, M.; Kádek, A.; Adámek, D.; Lhoták, P.; Kavan, D.; Hofbauerová, K.; Man, P.; Bojarová, P.; Křen, V.; Carboxylated calixarenes bind strongly to CD69 and protect CD69+ killer cells from suicidal cell death induced by tumor cell surface ligands Bioorganic and Medicinal Chemistry, 2010, 18(4), IF 2.978, s.1434-1440, DOI: 10.1016/j.bmc.2010.01.015
Kavan, D.; Kubíčková, M.; Bílý, J.; Vaněk, O.; Hofbauerová, K.; Mrázek, H.; Rozbeský, D.; Bojarová, P.; Křen, V.; Žídek, L.; Sklenář, V.; Bezouška, K.; Cooperation between Subunits Is Essential for High-Affinity Binding of N-Acetyl-D-hexosamines to Dimeric Soluble and Dimeric Cellular Forms of Human CD69 Biochemistry, 2010, 49(19), IF 3.226, s.4060-4067, DOI: 10.1021/bi100181a
Kulik, N.; Weignerová, L.; Filipi, T.; Pompach, P.; Novák, P.; Mrázek, H.; Slámová, K.; Bezouška, K.; Křen, V.; Ettrich, R.; The α-galactosidase type A gene aglA from Aspergillus niger encodes a fully functional α-N-acetylgalactosaminidase Glycobiology, 2010, 20(11), IF 3.791, s.1410-1419, DOI: 10.1093/glycob/cwq105
Kovalová, A.; Ledvina, M.; Šaman, D.; Zyka, D.; Kubíčková, M.; Žídek, L.; Sklenář, V.; Pompach, P.; Kavan, D.; Bílý, J.; Vaněk, O.; Kubínková, Z.; Libigerová, M.; Ivanová, Ľ.; Antolíková, E.; Mrázek, H.; Rozbeský, D.; Hofbauerová, K.; Křen, V.; Bezouška, K.; Synthetic N-Acetyl-D-glucosamine Based Fully Branched Tetrasaccharide, a Mimetic of the Endogenous Ligand for CD69, Activates CD69 Killer Lymphocytes upon Dimerization via a Hydrophilic Flexible Linker Journal of Medicinal Chemistry, 2010, 53(10), IF 5.207, s.4050-4065, DOI: 10.1021/jm100055b
Martínek, V.; Sklenář, J.; Dračínský, M.; Šulc, M.; Hofbauerová, K.; Bezouška, K.; Frei, E.; Stiborová, M.; Glycosylation Protects Proteins against Free Radicals Generated from Toxic Xenobiotics Toxicological Sciences, 2010, 117(2), IF 5.093, s.359-374, DOI: 10.1093/toxsci/kfq206
Vidová, V.; Novák, P.; Strohalm, M.; Pól, J.; Havlíček, V.; Volný, M.; Laser Desorption-Ionization of Lipid Transfers: Tissue Mass Spectrometry Imaging without MALDI Matrix Analytical Chemistry, 2010, 82(12), IF 5.874, s.4994-4997, DOI: 10.1021/ac100661h
Strohalm, M.; Kavan, D.; Novák, P.; Volný, M.; Havlíček, V.; mMass 3: A Cross-Platform Software Environment for Precise Analysis of Mass Spectrometric Data Analytical Chemistry, 2010, 82(11), IF 5.874, s.4648-4651, DOI: 10.1021/ac100818g
Rey, M.; Mrázek, H.; Pompach, P.; Novák, P.; Pelosi, L.; Brandolin, G.; Forest, E.; Havlíček, V.; Man, P.; Effective Removal of Nonionic Detergents in Protein Mass Spectrometry, Hydrogen/ Deuterium Exchange, and Proteomics Analytical Chemistry, 2010, 82(12), IF 5.874, s.5107-5116, DOI: 10.1021/ac100171m
Renaudet, O.; Křenek, K.; Bossu, I.; Dumy, P.; Kádek, A.; Adámek, D.; Vaněk, O.; Kavan, D.; Gažák, R.; Šulc, M.; Bezouška, K.; Křen, V.; Synthesis of Multivalent Glycoconjugates Containing the Immunoactive LELTE Peptide: Effect of Glycosylation on Cellular Activation and Natural Killing by Human Peripheral Blood Mononuclear Cells Journal of the American Chemical Society, 2010, 132(19), IF 9.019, s.6800-6808, DOI: 10.1021/ja101296t
Risso, A.; Santamaria, B.; Pistarino, E.; Cosulich, ME.; Pompach, P.; Bezouška, K.; Antonutto, G.; Fragmentation of Human Erythrocyte Actin following Exposure to Hypoxia Acta Haematologica, 2010, 123(1), IF 1.316, s.6-13, DOI: 10.1159/000256661
Sviridova, E.; Bumba, L.; Řezáčová, P.; Procházková, K.; Kavan, D.; Bezouška, K.; Kutý, M.; Šebo, P.; Kutá Smatanová, I.; Crystallization and preliminary crystallographic characterization of the iron-regulated outer membrane lipoprotein FrpD from Neisseria meningitidis Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2010, 66(9), IF 0.563, s.1119-1123, DOI: 10.1107/S174430911003215X
Přibylová, M.; Dvořáková, M.; Vaněk, T.; DERIVÁTY PAKLITAXELU PRO CÍLENÝ TRANSPORT CYTOSTATIKA Chemické listy, 2010, 104(11), IF 0.620, s.1023-1028
Šulc, M.; Hodek, P.; Stiborová, M.; The binding affinity of carcinogenic N-nitrosodimethylamine and N-nitrosomethylaniline to cytochromes P450 2B4, 2E1 and 3A6 does not dictate the rate of their enzymatic N- demethylation. General Physiology and Biophysics, 2010, 29(2), IF 1.146, s.175-185, DOI: 10.4149/gpb_2010_02_175
Bren, U.; Lah, J.; Bren, M.; Martínek, V.; Florian, J.; DNA Duplex Stability: The Role of Preorganized Electrostatics Journal of Physical Chemistry B, 2010, 114(8), IF 3.603, s.2876-2885, DOI: 10.1021/jp9064246
Vejvoda, V.; Kubáč, D.; Davidová, A.; Kaplan, O.; Šulc, M.; Šveda, O.; Chaloupková, R.; Martínková, L.; Purification and characterization of nitrilase from Fusarium solani IMI196840 Process Biochemistry, 2010, 45(7), IF 2.648, s.1115-1120, DOI: 10.1016/j.procbio.2010.03.033
Černý, M.; Doubnerová, V.; Müller, K.; Ryšlavá, H.; Characterization of phosphoenolpyruvate carboxylase from mature maize seeds: Properties of phosphorylated and dephosphorylated forms. Biochimie, 2010, 92(10), IF 3.787, s.1362-1370, DOI: 10.1016/j.biochi.2010.06.019
Ryšlavá, H.; Doubnerová, V.; Enzymy Hatchova-Slackova cyklu v C3 rostlinách Chemické listy, 2010, 104(12), IF 0.620, s.1175-1180
Zolotarevová, E.; Hudeček, J.; Špundová, M.; Entlicher, G.; Binding of proteins to ultra high molecular weight polyethylene wear particles as a possible mechanism of macrophage and lymphocyte activation Journal of Biomedical Materials Research - Part A, 2010, 95(3), IF 3.044, s.950-955, DOI: 10.1002/jbm.a.32924
Zolotarevová, E.; Entlicher, G.; Pavlová, E.; Šlouf, M.; Pokorný, D.; Veselý, F.; Gallo, J.; Sosna, A.; Distribution of polyethylene wear particles and bone fragments in periprosthetic tissue around total hip joint replacements Acta Biomaterialia, 2010, 6(9), IF 4.822, s.3595-3600, DOI: 10.1016/j.actbio.2010.04.010
Pokorný, D.; Šlouf, M.; Veselý, F.; Fulín, P.; Jahoda, D.; Sosna, A.; Běláček, J.; Landor, I.; Zolotarevová, E.; Popelka, S.; Distribuce otěrových částic UHMWPE v periprotetických tkáních u TEP kyčelního kloubu Acta Chirurgiae Orthopaedicae et Traumatologiae Čechoslovaca, 2010, 77(2), IF 1.628, s.87-92
Novotná, L.; Emmerová, T.; Horák, D.; Kučerová, Z.; Tichá, M.; Iminodiacetic acid-modified magnetic poly(2-hydroxyethyl methacrylate)-based microspheres for phosphopeptide enrichment Journal of Chromatography A, 2010, 1217(51), IF 4.194, s.8032-8040, DOI: 10.1016/j.chroma.2010.08.058
Kučerová, Z.; Muselová, H.; Miarková, E.; Tichá, M.; Size exclusion chromatography as a tool for evaluation of fragmentation pattern of gastric mucins under non-degrading conditions Prague medical report., 2010, 111(3), s.200-206
Bořek Dohalská, L.; Stiborová, M.; Cytochrome P450 3A activities and their modulation by α-naphthoflavone in vitro are dictated by the efficiencies of model experimental systems Collection of Czechoslovak Chemical Communications, 2010, 75(2), IF 0.853, s.201-220, DOI: 10.1135/cccc2009525
Adam, V.; Fabrik, I.; Eckschlager, T.; Stiborová, M.; Trnková, L.; Kizek, R.; Vertebrate metallothioneins as target molecules for analytical techniques. TrAC - Trends in Analytical Chemistry, 2010, 29(5), IF 6.602, s.409-418, DOI: 10.1016/j.trac.2010.02.004
Martínková, E.; Maglott, A.; Leger, DY.; Bonnet, D.; Stiborová, M.; Takeda, K.; Martin, S.; Dontenwill, M.; alpha5beta1 integrin antagonists reduce chemotherapy-induced premature senescence and facilitate apoptosis in human glioblastoma cells. International Journal of Cancer, 2010, 127(5), IF 4.926, s.1240-1248, DOI: 10.1002/ijc.25187
Svobodová, M.; Martínková, M.; Frei, E.; Stiborová, M.; Identification of human enzymes oxidizing a human metabolite of carcinogenic 2-nitroanisole, 2-nitrophenol. Evidence for its oxidative detoxification by human cytochromes P450. Collection of Czechoslovak Chemical Communications, 2010, 75(6), IF 0.853, s.703-719, DOI: 10.1135/cccc2010023
Stiborová, M.; Martínek, V.; Svobodová, M.; Šístková, J.; Dvořák, Z.; Ulrichová, J.; Šimánek, V.; Frei, E.; Schmeiser, HH.; Phillips, DH.; Arlt, VM.; Mechanisms of the different DNA adduct forming potentials of the urban air pollutants 2-nitrobenzanthrone and carcinogenic 3-nitrobenzanthrone Chemical Research in Toxicology, 2010, 23(7), IF 4.148, s.1192-1201, DOI: 10.1021/tx100052d
Húska, D.; Adam, V.; Křížková, S.; Hraběta, J.; Eckschlager, T.; Stiborová, M.; Kizek, R.; An electrochemical study of interaction of an anticancer alkaloid ellipticine with DNA. Chimica Oggi-Chemistry today, 2010, 28(5), IF 0.483, s.15-17
Húska, D.; Adam, V.; Hubálek, J.; Trnková, L.; Eckschlager, T.; Stiborová, M.; Provazník, I.; Kizek, R.; Off-line coupling of automated pipetting system with square wave voltammetry as a tool for study of drug-DNA interaction Chimica Oggi-Chemistry today, 2010, 28(5), IF 0.483, s.18-20
Naiman, K.; Hodek, P.; Liberda, J.; Schmeiser, HH.; Frei, E.; Stiborová, M.; Rat liver microsomal metabolism of o-aminophenol and N-(2-methoxyphenyl)hydroxylamine, two metabolites of the environmental pollutant and carcinogen o-anisidine in humans Collection of Czechoslovak Chemical Communications, 2010, 75(12), IF 0.853, s.1229-1247, DOI: 10.1135/cccc2010077
Páca, J.; Kostečková, A.; Pácová, L.; Prell, A.; Halecký, M.; Páca, J.; Stiborová, M.; Kozliak, E.; Soccol, CR.; Respirometry kinetics of phenol oxidation by Comamonas testosteroni Pb50 under various conditions of nutritional stress. Brazilian Archives of biology and technology, 2010, 53(6), IF 0.397, s.1519-1528, DOI: 10.1590/S1516-89132010000600030
Křížková, S.; Masařík, M.; Majzlík, P.; Kukačka, J.; Kruseová, J.; Adam, V.; Průša, R.; Eckschlager, T.; Stiborová, M.; Kizek, R.; Serum metallothionein in newly diagnosed patients with childhood solid tumours Acta Biochimica Polonica, 2010, 57(4), IF 1.234, s.561-566
Stiborová, M.; Moserová, M.; Mrázová, B.; Kotrbová, V.; Frei, E.; Role of cytochromes P450 and peroxidases in metabolism of the anticancer drug ellipticine: additional evidence of their contribution to ellipticine activation in rat liver, lung and kidney Neuroendocrinology Letters, 2010, 31(2), IF 1.621, s.26-35
Naiman, K.; Frei, E.; Stiborová, M.; Identification of rat cytochromes P450 metabolizing N-(2-methoxyphenyl)hydroxylamine, a human metabolite of the environmental pollutants and carcinogens o-anisidine and o- nitroanisole Neuroendocrinology Letters, 2010, 31(2), IF 1.621, s.36-45
Stiborová, M.; Poljaková, J.; Eckschlager, T.; Kizek, R.; Frei, E.; DNA and histone deacetylases as targets for neuroblastoma treatment Interdisciplinary toxicology, 2010, 3(2), s.47-52, DOI: 10.2478/v10102-010-0010-6
Fanfrlík, J.; Bronowska, AK.; Řezáč, J.; Přenosil, O.; Konvalinka, J.; Hobza, P.; A reliable docking/scoring scheme based on the semiempirical quantum mechanical PM6-DH2 method accurately covering dispersion and H-bonding: HIV-1 protease with 22 ligands. Journal of Physical Chemistry B, 2010, 114(39), IF 3.603, s.12666-12678, DOI: 10.1021/jp1032965
Majerová, T.; Hoffman, H.; Majer, F.; Therapeutic targets for influenza – perspectives for drug development Collection of Czechoslovak Chemical Communications, 2010, 75(1), IF 0.853, s.81-103, DOI: 10.1135/cccc2009087
Hoffman, H.; Jirásková, J.; Zvelebil, M.; Konvalinka, J.; Random mutagenesis of human serine racemase reveals residues important for the enzymatic activity Collection of Czechoslovak Chemical Communications, 2010, 75(1), IF 0.853, s.59-79, DOI: 10.1135/cccc2010003

2009

Motáčková, V.; Kubíčková, M.; Kožíšek, M.; Grantz Šašková, K.; Švec, M.; Žídek, L.; Sklenář, V.; Backbone (1)H, (13)C, and (15)N NMR assignment for the inactive form of the retroviral protease of the murine intracisternal A-type particle, inMIA-14 PR Biomolecular NMR Assignments, 2009, 3(2), IF 0.750, s.261-264 http://dx.doi.org/10.1007/s12104-009-9189-x
Stibingerová, A.; Velvarská, H.; Kynčlová, K.; Marounková, B.; Špundová, M.; Entlicher, G.; Lipoamide dehydrogenase and diaphorase catalyzed conversion of some NO donors to NO and reduction of NO scavenger 2-phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide (PTIO) General Physiology and Biophysics, 2009, 28(4), IF 0.741, s.384-390 http://dx.doi.org/10.4149/gpb_2009_04_384
Kolenko, P.; Skálová, T.; Vaněk, O.; Štěpánková, A.; Dušková, J.; Hašek, J.; Bezouška, K.; Dohnálek, J.; The high resolution structure of the extracellular domain of human CD69 using a novel polymer. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, 2009, 65(12), IF 0.551, s.1258-1260 http://dx.doi.org/10.1107/S1744309109043152
Stiborová, M.; Martínek, V.; Semanská, M.; Hodek, P.; Dračínský, M.; Cvačka, J.; Schmeiser, H.; Frei, E.; Oxidation of the carcinogenic non-aminoazo dye 1-phenylazo-2-hydroxynaphthalene (Sudan I) by cytochromes P450 and peroxidases: a comparative study Interdisciplinary Toxicology, 2009, 2(3), s.195-200
Pokorný, D.; Šlouf, M.; Dybal, J.; Zolotarevová, E.; Veselý, F.; Jahoda, D.; Vavřík, P.; Landor, I.; Entlicher, G.; Sosna, A.; Nová metoda kvantifikace otěrových částic UHMWPE v okolí kloubních náhrad Acta Chrirurgiae Orthopaedicae et Traumatologiae Čechoslovaca, 2009, 76(5), s.374-381
Moserová, M.; Kotrbová, V.; Svášková, D.; Šulc, M.; Frei, E.; Stiborová, M.; Analysis of benzo[a]pyrene metabolites formed by rat hepatic microsomes using high pressure liquid chromatography: optimization of the method Interdisciplinary Toxicology, 2009, 2(4), s.239-244
Hřebačková, J.; Poljaková, J.; Eckschlager, T.; Hraběta, J.; Procházka, P.; Smutný, S.; Stiborová, M.; Histone deacetylase inhibitors valproate and trichostatin A are toxic to neuroblastoma cells and modulate cytochrome P450 1A1, 1B1 and 3A4 expression in these cells Interdisciplinary Toxicology, 2009, 2(3), s.205-210
Šulc, M.; Pavlásková, K.; Žabka, M.; Hajduch, M.; Havlíček, V.; Biomarkers of Aspergillus spores: Strain typing and protein identification International journal of mass spectrometry, 2009, 280(1-3), IF 2.009 s.162-168 http://dx.doi.org/10.1016/j.ijms.2008.08.012
Martínková, L.; Vejvoda, V.; Kaplan, O.; Kubáč, D.; Malandra, A.; Cantarella, M.; Bezouška, K.; Křen, V.; Fungal nitrilases as biocatalysts: Recent developments Biotechnology advances, 2009, 27(6), IF 8.250, s.661-670 http://dx.doi.org/10.1016/j.biotechadv.2009.04.027
Grantz Šašková, K.; Kožíšek, M.; Řezáčová, P.; Brynda, J.; Yashina, T.; Kagan, R.; Konvalinka, J.; Molecular Characterization of Clinical Isolates of Human Immunodeficiency Virus Resistant to the Protease Inhibitor Darunavir Journal of Virology, 2009, 83(17), IF 5.150, s.8810-8818 http://dx.doi.org/10.1128/JVI.00451-09
Schmeiser, H.; Stiborová, M.; Arlt, V.; Chemical and molecular basis of the carcinogenicity of Aristolochia plants Current opinion in drug discovery & development, 2009, 12(1), IF 4.904, s.141-148
Hoffman, H.; Jirásková, J.; Cígler, P.; Šanda, M.; Schraml, J.; Konvalinka, J.; Hydroxamic acids as a novel family of serine racemase inhibitors: Mechanistic analysis reveals different modes of interaction with the pyridoxal-5'-phosphate cofactor Journal of Medicinal Chemistry, 2009, 52(19), IF 4.802, s.6032-6041 http://dx.doi.org/10.1021/jm900775q
Poljaková, J.; Eckschlager, T.; Hraběta, J.; Hřebačková, J.; Smutný, S.; Frei, E.; Martínek, V.; Kizek, R.; Stiborová, M.; The mechanism of cytotoxicity and DNA adduct formation by the anticancer drug ellipticine in human neuroblastoma cells Biochemical Pharmacology, 2009, 77(9), IF 4.254, s.1466-1479 http://dx.doi.org/10.1016/j.bcp.2009.01.021
Heyda, J.; Pokorná, J.; Vrbka, L.; Vácha, R.; Jagoda-Cwiklik, B.; Konvalinka, J.; Jungwirth, P.; Vondrášek, J.; Ion specific effects of sodium and potassium on the catalytic activity of HIV-1 protease Physical chemistry chemical physics, 2009, 11(35), IF 4.116, s.7599-7604 http://dx.doi.org/10.1039/b905462f
Bojarová, P.; Křenek, K.; Wetjen, K.; Adamiak, K.; Pelantová, H.; Bezouška, K.; Elling, L.; Křen, V.; Synthesis of LacdiNAc-terminated glycoconjugates by mutant galactosyltransferase – A way to new glycodrugs and materials Glycobiology, 2009, 19(5), IF 3.929, s.509-517 http://dx.doi.org/10.1093/glycob/cwp010
Dračínský, M.; Cvačka, J.; Semanská, M.; Martínek, V.; Frei, E.; Stiborová, M.; Mechanism of formation of (deoxy)guanosine adducts derived from peroxidase-catalyzed oxidation of the carcinogenic nonaminoazo dye 1-phenylazo-2-hydroxynaphthalene (Sudan I) Chemical Research in Toxicology, 2009, 22(11), IF 3.740, s.1765-1773 http://dx.doi.org/10.1021/tx900201q
Šustrová, B.; Novotná, L.; Kučerová, Z.; Tichá, M.; Immobilization of alpha-chymotrypsin to magnetic particles and their use for proteolytic cleavage of porcine pepsin A Journal of molecular catalysis b-enzymatic, 2009, 60(1-2), IF 2.400, s.22-28 http://dx.doi.org/10.1016/j.molcatb.2009.03.003
Hoffman, H.; Jirásková, J.; Ingr, M.; Zvelebil, M.; Konvalinka, J.; Recombinant human serine racemase: enzymologic characterization and comparison with its mouse ortholog Protein expression and purification, 2009, 63(1), IF 1.563, s.62-67 http://dx.doi.org/10.1016/j.pep.2008.09.003
Kotrbová, V.; Svášková, D.; Ingr, M.; Bořek Dohalská, L.; Martínek, V.; Stiborová, M.; Preparation of a biologically active apo-cytochrome b5 via heterologous expression in Escherichia coli Protein expression and purification, 2009, 66(2), IF 1.563, s.203-209 http://dx.doi.org/10.1016/j.pep.2009.03.011
Novák, F.; Kolář, F.; Hamplová, B.; Mrnka, L.; Pelouch, V.; Ošťádal, B.; Nováková, O.; Myocardial phospholipid remodeling under different types of load imposed during early postnatal development Physiological Research, 2009, 58(Suppl.2), IF 1.430, s.S13-S32
Doubnerová, V.; Müller, K.; Čeřovská, N.; Synková, H.; Spoustová, P.; Ryšlavá, H.; Effect of Potato Virus Y on the NADP-Malic Enzyme from Nicotiana tabacum L.: mRNA, Expressed Protein and Activity International Journal of Molecular Sciences, 2009, 10(8), IF 1.387, s.3583-3598 http://dx.doi.org/10.3390/ijms10083583
Svobodová, M.; Martínková, M.; Dračínská, H.; Frei, E.; Stiborová, M.; Rat cytochromes P450 oxidize 2-nitrophenol, a human metabolite of carcinogenic 2-nitroanisole Neuroendocrinology Letters, 2009, 30(Suppl.1), IF 1.047, s.46-51
Martínková, E.; Dontenwill, M.; Frei, E.; Stiborová, M.; Cytotoxicity of and DNA adduct formation by ellipticine in human U87MG glioblastoma cancer cells Neuroendocrinology letters, 2009, 30(Suppl.1), IF 1.047, s.60-66
Vilímková, L.; Jechová, J.; Koubková, Z.; Páca, J.; Kremláčková, V.; Poljaková, J.; Páca, J.; Stiborová, M.; Isolation and partial characterization of catechol 1,2-dioxygenase of phenol degrading yeast Candida tropicalis Neuroendocrinology Letters, 2009, 30(Suppl.1), IF 1.047, s.80-87
Mizerovská, J.; Dračínská, H.; Arlt, V.; Schmeiser, H.; Frei, E.; Stiborová, M.; Oxidation of 3-aminobenzanthrone, a human metabolite of carcinogenic environmental pollutant 3-nitrobenzanthrone, by cytochromes P450 – similarity between human and rat enzymes Neuroendocrinology Letters, 2009, 30(Suppl.1), IF 1.047, s.52-59
Hodek, P.; Teplá, M.; Křížková, J.; Šulc, M.; Stiborová, M.; Modulation of cytochrome P450 enzyme system by selected flavonoids NEUROENDOCRINOLOGY LETTERS, 2009, 30(Suppl.1), IF 1.047, s.67-71
Doubnerová, V.; Potůčková, L.; Müller, K.; Ryšlavá, H.; The regulation and catalytic mechanism of the NADP-malic enzyme from tobacco leaves Journal of the Serbian Chemical Society, 2009, 74(8-9), IF 0.820, s.893-906 http://dx.doi.org/10.2298/JSC0909893D
Mrázová, B.; Martínek, V.; Martínková, M.; Šulc, M.; Frei, E.; Stiborová, M.; Preparation of apo-cytochrome b5 utilizing heme transfer to apo-myoglobin Neuroendocrinology letters, 2009, 30(Suppl.1), s.72-79
Stiborová, M.; Frei, E.; Arlt, V.; Schmeiser, H.; A role of biotransformation enzymes in the Development of renal injury and urothelial cancer caused by aristolochic acid: Urgent questions difficult answers Biomedical Papers Medical Faculty University Palacky Olomouc Czech Republic, 2009, 153(1), s.5-11
Stiborová, M.; Naiman, K.; Martínková, M.; Martínek, V.; Svobodová, M.; Schmeiser, H.; Frei, E.; Genotoxic mechanisms for the carcinogenicity of the environmental pollutants and carcinogens o-anisidine and 2-nitroanisole follow from adducts generated by their metabolite N-(2-methoxyphenyl)-hydroxylamine with deoxyguanosine in DNA Interdisciplinary Toxicology, 2009, 2(1), s.24-27
Křížková, J.; Burdová, K.; Stiborová, M.; Křen, V.; Hodek, P.; The effects of selected flavonoids on cytochromes P450 in rat liver and small intestine Interdisciplinary Toxicology, 2009, 2(1), s.201-204
Balková, P.; Ježková, J.; Hlaváčková, M.; Neckář, J.; Staňková, B.; Kolář, F.; Novák, F.; Nováková, O.; Dietary polyunsaturated fatty acids and adaptation to chronic hypoxia alter acyl composition of serum and heart lipids British Journal of Nutrition, 2009,102(9), IF 3.446, s.1297-1307 http://dx.doi.org/10.1017/S0007114509389242
Pompach, P.; Man, P.; Kavan, D.; Hofbauerová, K.; Kumar, V.; Bezouška, K.; Havlíček, V.; Novák, P.; Modified electrophoretic and digestion conditions allow a simplified mass spectrometric evaluation of disulfide bonds. Journal of Mass Spectrometry, 2009, 44(11), IF 3.411, s.1571-1578 http://dx.doi.org/10.1002/jms.1609
Klusák, V.; Bařinka, C.; Plechanovová, A.; Mlčochová, P.; Konvalinka, J.; Rulíšek, L.; Lubkowski, J.; Reaction mechanism of glutamate carboxypeptidase II revealed by mutagenesis, X-ray crystallography and computational methods Biochemistry, 2009, 48(19), IF 3.226, s.4126-4138 http://dx.doi.org/10.1021/bi900220s
Mlčochová, P.; Bařinka, C.; Tykvart, J.; Šácha, P.; Konvalinka, J.; Prostate-specific membrane antigen and its truncated form PSM' Prostate, 2009, 69(5), IF 3.081, s.471-479 http://dx.doi.org/10.1002/pros.20894
Hlouchová, K.; Bařinka, C.; Konvalinka, J.; Lubkowski, J.; Structural insight into the evolutionary and pharmacologic homology of glutamate carboxypeptidases II and III FEBS JOURNAL, 2009, 276(16), IF 3.042, s.4448-4462 http://dx.doi.org/10.1111/j.1742-4658.2009.07152.x
Pontikis, G.; Borden, J.; Martínek, V.; Florian, J.; Linear Energy Relationships for the Octahedral Preference of Mg, Ca and Transition Metal Ions Journal of Physical Chemistry A, 2009, 113(15), IF 2.899, s.3588-3593 http://dx.doi.org/10.1021/jp808928f
Müller, K.; Doubnerová, V.; Synková, H.; Čeřovská, N.; Ryšlavá, H.; Regulation of phosphoenolpyruvate carboxylase in PVYNTN-infected tobacco plants Biological Chemistry, 2009, 390(3), IF 2.732, s.245-251 http://dx.doi.org/10.1515/BC.2009.029
Húska, D.; Adam, V.; Babula, P.; Hraběta, J.; Stiborová, M.; Eckschlager, T.; Trnková, L.; Kizek, R.; Square-wave voltammetry as a tool for investigation of doxorubicin interactions with DNA isolated from neuroblastoma cells Electroanalysis, 2009, 21(3-5), IF 2.630, s.487-494 http://dx.doi.org/10.1002/elan.200804429
Stiborová, M.; Dračínská, H.; Martínková, M.; Mizerovská, J.; Hudeček, J.; Hodek, P.; Liberda, J.; Frei, E.; Schmeiser, HH.; Phillips, DH.; Arlt, VM.; 3-Aminobenzanthrone, a human metabolite of the carcinogenic environmental pollutant 3-nitrobenzanthrone, induces biotransformation enzymes in rat kidney and lung Mutation research-genetic toxicology and environmental mutagenesis, 2009, 676(1-2), IF 2.552, s.93-101 http://dx.doi.org/10.1016/j.mrgentox.2009.04.013
Filuszová, M.; Kučerová, Z.; Tichá, M.; Peptide inhibitor modified magnetic particles for pepsin separation Journal of separation science, 2009, 32(12), IF 2.551, s.2017-2021 http://dx.doi.org/10.1002/jssc.200800750
Hodek, P.; Křížková, J.; Burdová, K.; Šulc, M.; Kizek, R.; Hudeček, J.; Stiborová, M.; Chemopreventive compounds-View from the other side Chemico-Biological Interactions, 2009, 180(1), IF 2.457, s.1-9 http://dx.doi.org/10.1016/j.cbi.2009.01.003
Pokorná, J.; Machala, L.; Řezáčová, P.; Konvalinka, J.; Current and Novel Inhibitors of HIV Protease Viruses, 2009, 1(3), s.1209-1239 http://dx.doi.org/10.3390/v1031209

Úplný seznam publikací