PCR a sekvenační primery pro nekodující úseky cpDNA
jméno |
forward |
sekvence |
velikost (bp) |
Ta |
reference |
reverse |
|||||
trnT-trnL | trnT2F | CAAATGCGATGCTCTAACCT |
527–1023 |
50-55 |
Taberlet et al. 1991, Cronn et al. 2002 |
trnL-b | TCTACCGATTTCGCCATATC | ||||
trnL-trnF | trnL-c | CGAAATCGGTAGACGCTACG |
602–1076 |
50 |
Taberlet et al. 1991 |
trnF-f | ATTTGAACTGGTGACACGAG | ||||
trnH-psbA | trnH | CGCGCATGGATTCACAATCC |
198–1077 |
50-56 |
Tate & Simpson 2003, Sang et al. 1997 |
psbA | GTTATGCATGAACGTAATGCTC | ||||
trnS-trnG | trnS | AGATAGGGATTCGAACCCTCGGT |
619–1035 |
50 |
Shaw et al. 2005 |
trnG2S | TTTTACCACTAAACTATACCCGC | ||||
trnG-trnG | trnG2G | GCGGGTATAGTTTAGTGGTAAAA |
697–1008 |
50 |
Ohsako & Ohnishi 2000, Shaw et al. 2005 |
trnG | GTAGCGGGAATCGGACCCGCATC | ||||
rpoB-trnC | rpoB | CKACAAAAYCCYTCRAATTG |
914–1309 |
50-57 |
Shaw et al. 2005 |
trnC | CACCCRGATTYGAACTGGGG |
pro další primery a podrobnější informace viz článek Shaw et al. (2005): The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. Am. J. Bot. 92: 142-166 (2005)
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